Plantactinospora sp. KBS50: CIK06_15705
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Entry
CIK06_15705 CDS
T05048
Name
(GenBank) DNA topoisomerase IV
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
plk
Plantactinospora sp. KBS50
Brite
KEGG Orthology (KO) [BR:
plk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
plk03032
]
CIK06_15705
03400 DNA repair and recombination proteins [BR:
plk03400
]
CIK06_15705
Enzymes [BR:
plk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CIK06_15705
DNA replication proteins [BR:
plk03032
]
Prokaryotic type
DNA Topoisomerases
CIK06_15705
DNA repair and recombination proteins [BR:
plk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CIK06_15705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
FliT
Motif
Other DBs
NCBI-ProteinID:
ASW55307
UniProt:
A0A248YPE5
LinkDB
All DBs
Position
complement(3533343..3535835)
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AA seq
830 aa
AA seq
DB search
MARRKDSSPARVDLTAFDQPGAQVFDNPLTTEVEDSYLEYAYSVIHSRALPDARDGLKPV
HRRILWSMSEQGHRPDRAHVKSARVVGDVMGRFHPHGDLAIYDALVRMAQGFSLNTPLID
GHGNFGSPDDGPAASRYTESRLSEAAMLLVGELGEDTVDPKPNYDGSLTEPTVLPAAFPN
LLVNGAAGIAVGMATNMIPHNLGEVVGAARWLINHPDASLDRLMEFVPGPDLPTGGLLLG
LDEVRRAYETGRGVVRMRARVRTGPLEGSRGRQAITVTELPYGVGAEKVIEKITDEVTRT
KRLQGIADVKDLTDRENGIRVVIECKVGVNPQALLADLYRLTPLEQSFGINNLVLVDGQP
RTLGLKELLEVFLAHRYEVVTRRTSYRRRRRQERLHLVDGLLIALLDIDRVVRLIRSSDD
AQAARDGLMREFGLSEIQAGYILDTPLRRLTRFDRLELEAEQERLRAEIEELSRILDDDA
VLRRVVSDELAEVGRRFAAARRTTLIDGDLKEVLAASAPAGPLEVADDPCQVILSATGLV
ARTAAESEEASEGQRRNGRVRHDAVRALVHSTARGQVLLVTSRGRAFKTDVLPLPVLPQQ
TGTVSLRGGMSAAELVPLEAGEVVVGLAPLGGADQGSPGLALGTRQGVVKVCAPEWPVRS
DQFDVIGLREGDEVVGAVWLTDGAEQVVFVTSDAQLLRFGAGLVRPQGLKGGGMAGVARA
ADAEVIFFGAVRTDDTEHGEPLVVTSTGLGVKVTPFAEYPAKGRATGGVRVQRFLKGETR
LAVAWVGPRPAAATGAGEPVELPEPNPRRDASGTPVLLGPEVVGHRIERG
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atggcacgccgcaaggacagcagcccggcccgggtcgacctgaccgccttcgaccagccg
ggcgcgcaggtcttcgacaacccgctcaccaccgaggtcgaggactcctacctggagtac
gcgtactcggtgatccactcgcgggcgttgccggacgcccgcgacggcctcaagccggtg
caccggcggatcctgtggtcgatgagcgagcaggggcaccggccggaccgggcgcacgtc
aagtcggcccgcgtggtgggtgacgtgatgggccgcttccacccgcacggcgacctggcc
atctacgacgcgctggtgcggatggcgcagggcttctcgctgaacacgccgctcatcgac
gggcacggcaacttcggcagcccggacgacgggccggccgccagccggtacaccgagtcc
cggctgtcggaggcggccatgctgctggtcggcgagctgggcgaggacaccgtcgacccc
aagcccaactacgacgggtcgctgaccgagccgacggtgctgccggcggccttcccgaac
ctgctggtcaacggcgccgccgggatcgcggtcgggatggccaccaacatgatcccgcac
aacctgggcgaggtggtcggcgccgcccgctggctgatcaaccacccggacgcgtcgctg
gaccggctcatggagttcgtgcccggccccgacctgcccaccggcggcctgctgctcggg
ctggacgaggtgcgccgggcgtacgagaccggccgcggcgtggtgcggatgcgggcccgg
gtccggaccgggccgctggagggcagccggggccggcaggcgatcaccgtgaccgaactg
ccgtacggggtgggtgccgagaaggtcatcgagaagatcaccgacgaggtgacccggacc
aagcggttgcagggcatcgccgacgtgaaggacctgaccgaccgggagaacggcatccgg
gtggtcatcgagtgcaaggtgggagtgaacccgcaggcgctgctcgccgacctctaccgg
ctcacgccgctggagcagtcgttcgggatcaacaacctggtgctggtggacggccagccg
cgcaccctgggcctcaaggagctgctggaggtcttcctggcgcaccgctacgaggtggtc
acccggcgcaccagctaccggcggcgccggcggcaggaacggctgcacctggtggacggc
ctgctgatcgcgctgctggacatcgaccgggtggtgcggttgatccggtccagcgacgac
gcccaggccgcgcgggacgggttgatgcgcgagttcggcctgtcggagatccaggccggc
tacatcctggacaccccgctgcgccggctgacccggttcgaccggttggagctggaggcc
gagcaggagcggctgcgcgccgagatcgaggagctgtcccggatcctcgacgacgacgcc
gtgctgcgccgggtggtctccgacgaactggccgaggtgggccggcggttcgccgccgcc
cggcggaccacgctgatcgacggcgacctgaaggaggtgctggccgcctccgcgccggcc
ggtccgctggaggtcgccgacgacccgtgccaggtgatcctctccgcgaccggcctggtg
gcccggacggcggccgagtcggaggaggcgtccgaggggcagcgccgcaacggccgggtc
cggcacgacgcggtacgcgcgctggtgcactccacggcgcgcggccaggtgctgctggtg
accagccggggccgggcgttcaagaccgacgtgctgccgctgccggtgctgccgcagcag
accgggacggtgtcgctgcgcggcggcatgtcggccgccgaactggtgccgctggaggcc
ggtgaggtggtggtcgggttggccccgctcggcggcgccgaccagggctcgccagggctg
gcgctgggcacccggcagggcgtggtgaaggtgtgcgccccggagtggccggtgcgctcg
gaccagttcgacgtgatcggcctgcgcgagggggacgaggtggtcggtgcggtgtggctg
accgacggggccgagcaggtggtgttcgtgacctccgacgcccagctgctgcggttcggg
gcgggactggtccgcccgcagggcctcaagggcggcggcatggccggcgtcgcgcgggcc
gccgacgccgaggtgatcttcttcggcgccgtacgcaccgacgacaccgaacacggggag
ccgctggtggtcacgtccaccggtctcggggtgaaggtgaccccgttcgccgagtacccg
gcgaaggggcgggcgaccggcggcgtccgggtgcagcggttcctcaagggagagacccgg
ctcgcggtggcctgggtcggaccgcggccggccgccgccaccggcgccggggagccggtg
gagctgccggaacccaacccgcgccgggacgcctccggcacgccggtgctgctcggcccc
gaggtcgtgggccaccggatcgaacgcggctga
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