Plantactinospora sp. KBS50: CIK06_15710
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Entry
CIK06_15710 CDS
T05048
Name
(GenBank) DNA topoisomerase IV subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
plk
Plantactinospora sp. KBS50
Brite
KEGG Orthology (KO) [BR:
plk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
plk03032
]
CIK06_15710
03400 DNA repair and recombination proteins [BR:
plk03400
]
CIK06_15710
Enzymes [BR:
plk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CIK06_15710
DNA replication proteins [BR:
plk03032
]
Prokaryotic type
DNA Topoisomerases
CIK06_15710
DNA repair and recombination proteins [BR:
plk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CIK06_15710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
HATPase_c
Toprim
Motif
Other DBs
NCBI-ProteinID:
ASW57749
UniProt:
A0A248YW22
LinkDB
All DBs
Position
complement(3535985..3538042)
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AA seq
685 aa
AA seq
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MTAQSDIRYGADDLTHLEGLDAVRKRPGMYIGSTDSRGVNHLVNEILDNATDEGVAGHAT
RIEVTLGADGSVQVDDDGRGIPTDINARSGISGVELVLTRLHAGGKFGGSGYKTSGGLHG
VGASAVNALSHRFDVSVRRGGQVHEISFRRGVPGEFDGAGPDADFTSRPGLRVARRMRRG
EPTGTTIRYWYDARYFETGAALDVEAVRSKLRNTAFLVPGVTYVLRDATAGEPAEEVFHF
PNGLADMVDFLAPPGDRPVCDTLLITGEGSYRENAADANGVMQANVARRAEVEIALRWGT
GYDRTVECFSNTIRNAHGGTHRRGFERAAVRALTEAIRGTRGLLRPKEDPPTVEDVLEGM
TAVVHVRIPEPQFTSQTKDELSTAGITKVVQTVVEQHLRAWTEARRSRTEARTVLQKIVD
AARVRLAHKQQKDAARRKTALEGAAMPAKLVDCRSTGIDRSELFIVEGDSALGTSRMARS
SEYQALLPIRGKILNVQKASLQQVLDNAECSSIVQVLGAGSGRTFDLGAMRYGRVLIMAD
ADVDGSHIRTLLITLFAKYMRPVIEAGRLYAAMPPLHKIVTKGRNPETIFTYTQAEMETT
VARLEKRGRQVVTPIPRFKGLGEMDADELWDTTMNPAARSVRRITLHDIEAAERTLELLM
GEKVEPRKNWLIDAAGRIDQSAIDA
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
ttgaccgcgcagtccgacatccgctacggcgccgacgacctgacccacctcgaagggttg
gacgccgtccgcaagcgacccggcatgtacatcggctccaccgacagccgtggggtcaac
cacctggtcaacgagatcctggacaacgccaccgacgagggcgtcgccgggcacgcgacc
cggatcgaggtgaccctcggcgcagacgggtcggtgcaggtcgacgacgacgggcggggc
attcccaccgacatcaacgcccgctccggcatctccggcgtggagctggtgctcacccgg
ctgcacgccggcgggaagttcggcggctccggctacaagacctccggcggcctgcacggc
gtcggcgcctcggcggtcaacgcgctgtcgcaccggttcgacgtctcggtccgccgcggc
gggcaggtgcacgagatctcgttccgccgcggtgtccccggcgagttcgacggcgccggc
ccggacgcggacttcacgtcgcgacccgggctgcgggtcgcccgccggatgcgccggggc
gagccgaccggcaccaccatccggtactggtacgacgcccggtacttcgagaccggcgcc
gcgctggacgtcgaggcggtccgctcgaagctgcgcaacaccgcgttcctggtcccgggc
gtgacctacgtgctgcgggacgcgaccgccggcgagcccgcggaggaggtgttccacttc
cccaacggcctggccgacatggtcgacttcctcgcgccgccgggtgaccggccggtctgc
gacactttgctgatcaccggcgagggcagctaccgggagaacgcggccgacgccaacggg
gtcatgcaggccaacgtcgcgcgccgggccgaggtcgagatcgcgctgcgctggggcacc
ggctacgaccgtacggtggagtgcttcagcaacacgatccgcaacgcgcacggcggcacc
caccggcgcgggttcgagcgggccgccgtgcgggcgctgaccgaggccatccgcggcacc
cgcgggctgctgcggccgaaggaggatccgcccaccgtcgaggatgtcctggaggggatg
accgcggtggtgcacgtccggatcccggagccgcagttcacctcgcagaccaaggacgag
ttgtccaccgcgggcatcaccaaggtggtgcagacggtggtggagcagcacctgcgggcc
tggacggaggcccggcgcagccggaccgaggcgcgcaccgtgttgcagaagatcgtcgac
gcggcccgggtccggctggcgcacaagcagcagaaggacgccgcccggcgcaagaccgcg
ctggagggcgcggccatgccggccaagctggtggactgccgctccaccggcatcgaccgc
agcgagctgttcatcgtggagggcgacagcgcgctcggcaccagccggatggcccgctcc
tcggagtaccaggcgttgctgccgatccggggcaagatcctcaacgtccagaaggccagc
ctgcaacaggtgctggacaacgccgagtgctcgtcgatcgtgcaggtgctgggcgccggc
tcggggcgcaccttcgacctcggcgccatgcggtacggccgggtgctgatcatggcggac
gccgacgtggacggctcacacatccgcaccctgctgatcacgctgttcgcgaagtacatg
cggccggtgatcgaggcgggccggctgtacgcggcgatgccgccgctgcacaagatcgtc
acgaaggggcgcaacccggagacgatcttcacgtacacccaggcggagatggagaccacg
gtcgcccggctggagaagcgcggccggcaggtggtcaccccgattccccggttcaagggt
ctgggcgagatggacgccgacgagctgtgggacaccacgatgaacccggccgcccggtcg
gtccggcggatcacgctgcacgacatcgaggccgccgagcggaccctggagctgctgatg
ggggagaaggtcgagccccgcaagaactggctgatcgacgccgccggccggatcgaccag
tcggccatcgacgcatga
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