Plantactinospora sp. KBS50: CIK06_19970
Help
Entry
CIK06_19970 CDS
T05048
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
plk
Plantactinospora sp. KBS50
Pathway
plk03030
DNA replication
plk03410
Base excision repair
plk03420
Nucleotide excision repair
plk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
plk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CIK06_19970
03410 Base excision repair
CIK06_19970
03420 Nucleotide excision repair
CIK06_19970
03440 Homologous recombination
CIK06_19970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
plk03032
]
CIK06_19970
03400 DNA repair and recombination proteins [BR:
plk03400
]
CIK06_19970
Enzymes [BR:
plk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CIK06_19970
DNA replication proteins [BR:
plk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CIK06_19970
DNA repair and recombination proteins [BR:
plk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CIK06_19970
NER (nucleotide excision repair)
GGR (global genome repair) factors
CIK06_19970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
HHH_5
DNA_pol_A_exo1
DNA_pol_lambd_f
IMS_HHH
HHH
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
ASW55964
UniProt:
A0A248YQG6
LinkDB
All DBs
Position
complement(4667502..4670189)
Genome browser
AA seq
895 aa
AA seq
DB search
MTATTPRLLLLDGHSLAYRAFFALPVENFSTTTGQPTNAVYGFTSMLINVLRDERPTHVV
VAFDLSRRSFRTEKYADYKAGRKESPPEFAGQVSLIKEVLTALRIPAVEKENYEADDVIA
TLACQARDAGMSVLICTGDRDAFQLVGEQVTVLYPRKGVSDLARMDPAAVTERYGVGPDR
YRDLAALVGESSDNLSGIPGVGPKTAAKWINTYGGVEGVVAQADAIKGKAGESLRERLAD
VIRNYDLNRLVIDLELPLRPDDALWAGWDREAVHQVFDTLEFRILRDRLYQYLDAVEPEA
EAGFELAGEQLGAGAVAGWIETHLPAGTPCGVAVSGSFGRGAGELTGMALATADGVAAWF
DPAALEPADDAAVAAWLADAQRPKVLHDSKPAMLAFAERGWSLGGVARDTALAAYLARPD
QRSYDLTDLALRYLHRELKVDAPADGQLTIDGLGDEGEVERNLMLRARATLDLAEAIGAE
LARDGELSSRLLAEVELPLVGVLGTMERIGIAADTDYLSELEAHFAAGVKEAAQAAYAVV
GREFNLGSPKQLQEILFGDLGLPKTKRIKTGYTTDADALQWLFVQTEHPLLAHLLRHRDV
ARLKSTVDGLLKSVSPDGRIHTTFNQTVAATGRLSSTDPNLQNIPIRTEEGRRIRRAFVV
GEGYESLLSADYSQIEMRIMAHLSGDAALIEAFNSGADFHAATASSVFTVPLSEVTADQR
RKIKAMNYGLAYGLSAFGLSQQLGISAEEARGLMEEYFSRFGGVRDYLHEVVDRARRDGY
TETILGRRRYLPDLVSDNRQRREMAERMALNAPIQGSAADIIKKAMLQVDAALRGSDLGS
RMLLQVHDELVFEVAPGERDALVEVVRREMGGAYPLQVPLEVSVGAGRDWNSAEH
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgcgacgactccgcgcctgctgctgctcgacggacattccctggcctaccgggcg
ttcttcgccctgccggtggagaacttctccaccaccacggggcagccgacgaacgcggtc
tacggcttcacctccatgctgatcaacgtgctccgggacgagcggccgacgcacgtcgtg
gtggccttcgacctgtcccgccgctcgttccgcaccgagaagtacgcggactacaaggcc
ggccgcaaggagagcccgcccgagttcgccggccaggtcagcctgatcaaggaggtgctg
acggcgctgcggatcccggcggtcgagaaggagaactacgaggccgacgacgtgatcgcc
acgctggcctgccaggcgcgcgacgcggggatgtcggtgctgatctgcaccggcgaccgg
gacgccttccaactggtcggtgagcaggtcaccgtgctctacccgcgcaagggcgtgtcg
gacctggcccggatggatccggccgcggtgaccgagcgctacggcgtcggcccggaccgc
tatcgggacctcgccgcgctggtcggcgagagcagcgacaacctctccggcatcccgggc
gtcggaccgaagaccgcggccaagtggatcaacacgtacggcggcgtggagggcgtggtc
gcgcaggccgacgcgatcaagggcaaggccggcgagagcctgcgggagcggctggccgac
gtgatccgcaactacgatctcaaccgcctggtcatcgacctggagttgccgctgcgcccg
gacgacgcgctctgggccggctgggaccgggaggcggtgcaccaggtcttcgacacgctg
gagttccggatcctgcgcgaccggctctaccagtacctcgacgcggtggaaccggaggcc
gaggccgggttcgagctggccggcgagcagctcggcgccggtgcggtggccggctggatc
gagacgcacctgccggccggcaccccgtgcggggtggcggtcagcggcagcttcgggcgc
ggcgccggtgagctgaccgggatggccctggcgaccgccgacggggtggcggcctggttc
gacccggcggcgctggagccggccgacgacgcggccgtggccgcctggctggccgacgcg
cagcggcccaaggtgttgcacgacagcaagccggcgatgctggcgttcgccgagcgcggc
tggtcgctgggcggggtggcccgggacaccgcgctggccgcctacctggcccggcccgac
cagcgctcgtacgacctgaccgacctggccctgcgctacctgcaccgggagctgaaggtg
gacgccccggccgacggtcagctcaccatcgacggcctgggcgacgagggcgaggtcgag
cgcaacctgatgctgcgcgcccgggccaccctggatctggccgaggcgatcggcgccgaa
ctggcccgggacggggagctgtccagccggctgctggccgaggtggagctgccgctggtg
ggtgtcctgggcacgatggagcggatcggcatcgccgccgacacggactacctgtcggag
ctggaggcgcacttcgcggccggggtgaaggaggccgcccaggcggcgtacgcggtggtg
ggccgggagttcaacctgggctcgccgaagcagttgcaggagatcctgttcggcgatctc
ggcctgccgaagacgaagcggatcaagaccggctacaccaccgacgccgacgcgctgcag
tggctgttcgtgcagaccgagcacccgctgctagcgcacctgctccggcaccgcgacgtg
gcccggctgaagtccacggtggacggcctgctcaagtcggtctccccggacgggcgcatc
cacaccacgttcaaccagaccgtcgcggccaccggccggctctcctcgaccgaccccaac
ctgcagaacatccccatccgcaccgaggagggcaggcggatccgccgggcgttcgtggtg
ggggaggggtacgagtcgctgctgtcggccgactacagccagatcgagatgcggatcatg
gcgcatctgtccggggacgccgcgttgatcgaggcgttcaactccggcgcggacttccac
gccgccacggcctcgtcggtgttcaccgtgccgctgtccgaggtgaccgccgaccagcgg
cgcaagatcaaggcgatgaactacggcctcgcgtacgggctgagcgcgttcgggctctcc
cagcagctcggcatctccgccgaggaggcgcgggggctgatggaggagtacttcagccgg
ttcggcggggtacgggactacctgcacgaggtggtggaccgggcccggcgggacgggtac
accgagacgatcctcggccgtcgccgctacctgccggatctggtcagcgacaaccggcag
cggcgggagatggccgagcggatggcgctcaacgcccccatccagggctccgccgccgac
atcatcaagaaggcgatgctccaggtggacgccgcgctgcgcggctccgatctcggctcg
cggatgctgctgcaggtgcacgacgaactggtcttcgaggtcgcccccggcgagcgggac
gcgctggtcgaggtggtccgccgcgagatgggcggggcgtacccgctccaggtgccgctg
gaggtgtcggtcggtgccggccgggactggaacagcgccgagcactga
DBGET
integrated database retrieval system