Plantactinospora sp. KBS50: CIK06_20270
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Entry
CIK06_20270 CDS
T05048
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
plk
Plantactinospora sp. KBS50
Pathway
plk03030
DNA replication
plk03430
Mismatch repair
plk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
plk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CIK06_20270
03430 Mismatch repair
CIK06_20270
03440 Homologous recombination
CIK06_20270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
plk03032
]
CIK06_20270
03400 DNA repair and recombination proteins [BR:
plk03400
]
CIK06_20270
Enzymes [BR:
plk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CIK06_20270
DNA replication proteins [BR:
plk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CIK06_20270
DNA repair and recombination proteins [BR:
plk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CIK06_20270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
ASW56009
UniProt:
A0A248YR25
LinkDB
All DBs
Position
complement(4736842..4740375)
Genome browser
AA seq
1177 aa
AA seq
DB search
MSDSFVHLHVHTEYSMLDGAARLKELFAETDRLGMPALAMTDHGNLYGAYDFHKQATAAG
VKPVIGLEAYLTPGTHRGDRTRVRWADGGENDVSGGGAYTHMTMLAQDADGLRNLFRLGS
RSSLEGYFYKPRADRELLHEYARGIIATTGCPSGEVQTWLRIGNFDKACESAAEFRDIFG
PDNFYLELMDHGLGIETRVREDLLRLGRRLNLRPVATNDLHYTYEKDADAHEVLLCVQSG
STMADPKRFKFDARDFYLKSPAEMRAMWDAEVPGACDNTLEIAERIGDYAEVFASRKLMP
QFPVPAGETEESWLRKEVLRGLEHRFPAGVPEDRRVQAEYELDVILKMGFPGYFLVTADL
VAYAKREGIRVGPGRGSAAGALIAYALGITELDPMSHGLLFERFLNPDRISMPDIDMDFD
ERRRGDMIRYATEKYGDDRVSQIITYGTIKAKAAIKDAARVLGYPFAMGDRITKAMPPAV
MGKDIPLSGIFDSKHPRYPEAVEFRQLYESDGEVQKIVDTAKGLEGLKRQWGVHAAGVIL
SRDPLIDVLPIHKREQDGAIITQWDMGACETIGLLKMDFLGLRNLTIMDDCLDSIRDNRG
VELVLEELPLDDKPAYQLLARGDTLGVFQLDGGPMRSLLRSMVPDNFEDISAVLALYRPG
PMGANAHNEYADRKNGRKPVVPIHPELAEALADILGDTYGLIVYQEQVMAIAQQLAGYTL
GQADLLRRAMGKKKKEILDKEFVPFSGGMKDKGYSPEAIKTLWDILVPFSDYAFNKAHTA
GYGLVSYWTAYLKANYPAEYMAALLTSVGDDKDKSAVYLAECRRMGIKVLPPDVNESNAR
FAAVGEDIRFGLAAVRNVGTNVVESIRRSRQEKGAFADFYDYLRKVDAVACNKKTVESLI
KAGAFDSLRHTRKGLLAIHVDAIDSFLDIKRNEAVGQYDLFGDAFGGGDSGGGGMVVTPP
IPDGEWDKADLLSFEREMLGLYVSDHPLFGVEHVLAKAADMAIPALFEEGRVTDGQVVTL
AGILSGVQRRITKQGRAWASASLEDLGGAVEVLFFPNTYELVGQYIAEDAIVVVKGRVDR
RDDQPRLMAMDLSIPDITAADEVKPVVLALPPSRCTPPLVERLREVLTSHPGSAEVHVKL
VNGSRATLLRLGPTRVAPTTALMADLKALLGPSAVAG
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
gtgtctgactcgttcgtgcatctgcacgtgcacaccgagtattcgatgctcgacggggcc
gcccggctcaaggagctgttcgccgagaccgaccggctgggcatgccggccctggcgatg
accgaccacggcaacctgtacggggcgtacgacttccacaagcaggccaccgccgccggg
gtgaagccggtgatcggcctggaggcgtacctgaccccgggaacccaccgcggcgaccgg
acccgggtccggtgggccgacggcggcgagaacgacgtctccggcggcggcgcgtacacc
cacatgacgatgctggcccaggacgccgacgggctgcgcaacctgttccggctgggctcc
cggtccagcctggagggttacttctacaagccgcgcgccgaccgggaactcctgcacgag
tacgcccggggcatcatcgccaccaccggctgcccctccggcgaggtgcagacctggctg
cggatcggcaacttcgacaaggcgtgcgagtccgcggccgagttccgggacatcttcggc
ccggacaacttctacctggagctgatggaccacgggctcggcatcgagacccgggtccgg
gaggacctgctgcggctgggcaggcggctgaacctgcggccggtggccaccaacgacctg
cactacacgtacgagaaggacgccgacgcgcacgaggtgctgctctgcgtgcagtccggc
tcgacgatggccgaccccaagcggttcaagttcgacgcccgcgacttctacctcaagtcc
cctgccgagatgcgcgcgatgtgggacgccgaggtccccggggcctgcgacaacaccctg
gagatcgccgagcggatcggcgactacgccgaggtgttcgcctcccgcaagctgatgccg
cagttcccggtgccggccggcgagaccgaggagtcgtggctgcgcaaggaggtgctgcgc
ggcctggagcaccggttccccgccggggtgccggaggaccggcgggtgcaggccgagtac
gagcttgacgtgatcctcaagatgggcttcccgggctacttcctggtcaccgccgacctg
gtcgcgtacgccaagcgggagggcatccgggtggggccgggccgcggctcggcggccggc
gcgctgatcgcgtacgcgctcggcatcaccgaactcgacccgatgtcgcacggcctgctg
ttcgagcggttcctcaaccccgaccggatctcgatgcccgacatcgacatggacttcgac
gaacgtcggcgcggggacatgatccggtacgccaccgagaagtacggcgacgaccgggtc
tcgcagatcatcacgtacggcacgatcaaggcgaaggccgcgatcaaggacgccgcccgg
gtgctcggctacccgttcgcgatgggtgaccggatcaccaaggccatgccgccggcggtg
atgggcaaggacatcccgctgtcgggcatcttcgactcgaagcatccccgctacccggag
gcggtcgagttccgccagctctacgagtcggacggggaagtccagaagatcgtcgacacc
gccaagggcctggaggggctcaagcggcagtggggggtgcacgccgccggggtgatcctg
tcccgggacccgctgatcgacgtgctgccgatccacaagcgggagcaggacggcgcgatc
atcacccagtgggacatgggcgcgtgcgagaccatcggcctgctcaagatggacttcctg
ggcctgcgcaacctcacgatcatggacgactgcctggactccatccgggacaaccggggc
gtcgaactggtcctggaggagttgccgctggacgacaagccggcctaccaactgctggcc
cgcggtgacacgctcggcgtcttccagctcgacggcggcccgatgcgctcgctgctgcgc
tcgatggtgccggacaacttcgaggacatctccgccgtgctggcgctgtaccggccgggt
ccgatgggcgccaacgcgcacaacgagtacgccgaccgcaagaacggccgcaagccggtg
gtgccgatccacccggagctggccgaggcgctggccgacatcctgggcgacacctacggc
ctgatcgtctaccaggaacaggtcatggccatcgcccagcagctcgccgggtacacgctc
ggccaggccgacctgctgcgccgggcgatgggcaagaagaagaaggagatcctggacaag
gagttcgtgccgttctcgggcggcatgaaggacaagggctactcgcccgaggccatcaag
acgctctgggacatcctcgtcccgttctccgactacgcgttcaacaaggcgcacaccgcc
gggtacgggctggtctcgtactggacggcgtacctgaaggccaactatccggccgagtac
atggccgcgctgctcacctcggtcggcgacgacaaggacaagtccgcggtctacctggcc
gagtgccgcaggatgggcatcaaggtgctgccgccggacgtcaacgagtccaacgcccgg
ttcgccgccgtgggcgaggacatccggttcggcctggccgcggtccgcaacgtcggcacc
aacgtggtcgagtcgatccggcggtcccggcaggagaagggcgcgttcgccgacttctac
gactacctgcgcaaggtcgacgcggtggcctgcaacaagaagacggtggaatccctgatc
aaggcgggcgcgttcgactcgctccggcacacccgcaagggactgctggcgatccacgtg
gacgccatcgactcgttcctggacatcaagcgcaacgaggccgtcggccagtacgacctg
ttcggcgacgcgttcggcggcggcgactcgggcggtggcggcatggtggtgacgccgccg
atcccggacggcgagtgggacaaggccgacctgctcagcttcgagcgggagatgctcggc
ctgtacgtctccgaccacccgctgttcggcgtggagcacgtgctcgccaaggccgccgac
atggcgatcccggcgctgttcgaggagggccgggtcaccgacggccaggtggtgacgctg
gccggcatcctctccggggtgcagcgccggatcaccaagcagggccgggcgtgggcctcg
gccagcctggaggacctgggcggcgccgtcgaggtgctgttcttcccgaacacgtacgaa
ctggtcggccagtacatcgccgaggacgccatcgtggtggtcaagggccgggtggaccgg
cgcgacgaccagccccggctgatggcgatggatctgtccattccggacatcaccgcggcc
gacgaggtgaagccggtggtgctggcgctgccgccgtcgcgctgcacgccgccgctggtg
gagcggctgcgtgaggtgctgaccagccatcccggctcggccgaggtgcacgtcaagctg
gtcaacggttcccgggccacgctgctgcggctcggaccgacccgggtggcgccgaccacg
gcgctgatggccgacctgaaggccctgctcggccccagcgccgtcgccggctga
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