Plantactinospora sp. KBS50: CIK06_25915
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Entry
CIK06_25915 CDS
T05048
Name
(GenBank) hypothetical protein
KO
K03555
DNA mismatch repair protein MutS
Organism
plk
Plantactinospora sp. KBS50
Pathway
plk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
plk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CIK06_25915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plk03400
]
CIK06_25915
DNA repair and recombination proteins [BR:
plk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
CIK06_25915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
AAA_22
AAA_14
Motif
Other DBs
NCBI-ProteinID:
ASW56860
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All DBs
Position
5992264..5993805
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AA seq
513 aa
AA seq
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MTEPAFRSILFDDPADRDGVDERPVPDYFGDLNLDQVTAAVTRGRDSYRLAPFFHTPLRR
VEAVAYRHEVFRELRRPEVRGAVAGFADRMRTVRDRLGQARRARYAPQRQLWFLDAADGY
SAAVARLSEELDGLPLRSRGLCGLRRFLRSHVADQPFAERAVEAAGLRDRVAAVRYTIDI
QGDRIRVGRYAGEPDYSGEIADTFARFRPGEARRRRSARQDLTEMNHVEAVVLQYVTELH
PEVFGDVREFCARHDDFLDPVVTDFDREVQFYLAWLDYLDFLGEHGLRCCLPEVSATSRR
TEVRQSFDVALADRLGRDSRPVIPNDVELHGDERILVISGPNQGGKTTYARMVGQLHHLA
RLGCPVPGSRARLFLADGIFTHFEREEVATDLHGRLEDDLLRVRHILDRATADSVVIMNE
IFTSTTLEDALLLGGKIMDRLIRLGCLGVYVTFVDELSRLGPATVSLVSTVEAADAARRT
FKVVRRAADGLSYALSLAQKYGLTYESLTERIR
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagccggccttccggagcatcctgttcgacgacccggccgaccgcgacggtgtc
gacgagcggccggtgcccgactacttcggggatctcaacctggaccaggtgaccgcggcg
gtcacccggggccgcgacagctaccggctcgcccccttcttccacacaccgctgcggcgt
gtcgaagcggttgcctaccggcacgaggtcttccgcgagctgcgccggcccgaggtacgc
ggggcggtggccggcttcgccgaccggatgcggacggtacgcgaccggctgggtcaagcc
cgacgggcccggtacgccccgcagcggcagctgtggttcctcgatgccgccgacggctac
tcggcggcggtcgcccggttgagcgaggagctggacggcctgccgctgcgctcgcgcggg
ctgtgcgggctgcgccgcttcctccggtcgcacgtcgccgaccagccgttcgcggagcgc
gcggtggaggccgccggcctgcgtgaccgggtcgcggcggtgcggtacacgatcgacatc
cagggtgaccggatcagggtcggccgctacgcgggcgagcccgactacagcggcgagatc
gccgacacgtttgcccggttccggccgggcgaggcccgaaggcgccgctccgcccgccag
gacctcaccgagatgaaccatgtcgaggcggtggtgttgcagtatgtgaccgagctgcat
ccggaggtcttcggcgacgtacgggagttctgtgcccggcacgacgacttcctggacccg
gtggtcaccgacttcgaccgcgaggtgcagttctacctggcctggctcgactacctggac
ttcctcggcgagcacggcctgcggtgctgcctgccggaggtgtcggccaccagccggcgg
accgaggtccggcagtccttcgacgtggccctggccgaccggctgggccgggactcgcgc
ccggtgatccccaacgacgtcgagttgcacggcgacgagcgcatcctggtgatctccggg
ccgaaccagggcggcaagaccacgtacgcccgcatggtgggccaactgcaccacctggcc
cggctcggctgcccggtcccgggcagccgggcccggttgttcctggccgacggcatcttc
acgcacttcgagcgcgaggaggtggccaccgacctgcacggccggctggaggacgacctg
ctgcgggtgcggcacatcctcgaccgggccacggccgacagcgtggtcatcatgaacgag
attttcacctcgaccacgctggaggacgccctgctgctgggcgggaagatcatggaccgg
ctcatccggctcggctgcctcggtgtctacgtcacgttcgtcgacgagttgtcccggctg
ggtccggccacggtgagcctggtcagcacggtcgaggcggcggacgccgcgcggcgcacg
ttcaaggtcgtccgccgggcggccgacgggctgtcgtacgcgctcagcctcgcccagaag
tacggcctgacctacgagtcgctgacggagcggatccgatga
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