Plantactinospora sp. KBS50: CIK06_26870
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Entry
CIK06_26870 CDS
T05048
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
plk
Plantactinospora sp. KBS50
Brite
KEGG Orthology (KO) [BR:
plk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plk03400
]
CIK06_26870
DNA repair and recombination proteins [BR:
plk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CIK06_26870
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
DnaB_C
DUF7125
ChlI
AAA
NACHT
AAA_22
DUF7129
AAA_16
ABC_tran
nSTAND_NTPase5
Diacid_rec
Lon_C
AAA_30
AAA_29
nSTAND3
NTPase_1
AAA_5
RsgA_GTPase
DZR
AAA_14
TniB
PAXNEB
Motif
Other DBs
NCBI-ProteinID:
ASW57003
LinkDB
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Position
6203198..6204646
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AA seq
482 aa
AA seq
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MNSRSVSRTGSSPRGRGTARDPRPAYECDACGHQPPKWVGRCPECGEWGSVVESTLTGPT
VSGRVVSSRAPAEPARPIATISAAPARARPTGVPELDRVLGGGLVPGAVVLLAGEPGVGK
STLLLDVAQQWAAGAGSPSLVVSGEESVSQVRLRAERMGALHDQLYLAAENDLSAVLGHL
DAVKPGLLVLDSVQTISVSGTDGVSGGVTQVRAVTAALVAVAKERGIATVLVGHVTKDGQ
VAGPRVLEHLVDVVLHFEGDKHSSLRMVRGVKNRFGAADEVGCFEMHEGGITSLADPSGL
FLTRYSEAVPGTCVTVAMEGRRALLTEVQALIGATVAGSPRRTVSGLDGARLAMVLAVLQ
RRTDRLTLHDREVFAATVGGIRVVEPAADLAVALAVASGGINLAIAPHLVAIGEVGLTGE
VRRVGAVPRRLAEAARLGFRYALVPPGCGPEATGIKPDGMRITEVGDVRTALNMAARLSV
DD
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
gtgaattcccgctcggtatcccgtaccggatcgtcgccgcgcggccgcggcacggcccgc
gacccccgtccggcctacgagtgcgacgcctgcggccaccagccgcccaaatgggtgggc
cgatgccccgagtgcggcgagtggggttcggtggtcgagtccaccctgaccgggccgacg
gtctccgggcgggtggtcagctcccgggccccggccgagcccgcccggccgatcgccacg
atcagcgccgcgccggcccgcgcccggccgaccggggtgcccgagctggaccgggtgctc
ggcggcggtctggtgcccggcgccgtggtgctgctggccggtgagccgggggtcggcaag
tcgaccctgctgctcgacgtcgcccagcagtgggcggccggcgccggcagcccttcgctg
gtggtcagcggcgaggagtcggtcagccaggtccggctccgggccgaacggatgggcgcc
ctgcacgaccagctctatctcgccgccgaaaatgacctgtcggccgtgctggggcacctc
gacgcggtgaagccggggctgctggtgctggactccgtgcagacgatctcggtgtccggc
accgacggggtgtccggcggggtgacccaggtgcgggccgtcacggcggcgctggtcgcg
gtcgccaaggaacgcggcatcgcgaccgtgctggtggggcacgtgaccaaggacggtcag
gtggccgggccacgggtgctggagcacctggtcgacgtggtgctgcacttcgagggcgac
aagcactcctcgctgcgcatggtgcgcggcgtcaagaaccggttcggcgcggccgacgag
gtcggctgcttcgagatgcacgaggggggcatcaccagcctcgccgacccctccggcctg
ttcctcacccgctactccgaggcggtgccgggcacctgcgtcacggtggccatggagggc
cgccgggccctcctcaccgaggttcaggcgctgatcggagccacggtggccggctcgccc
cggcggaccgtgtcggggctggacggggcgcggctggcgatggtcctcgcggtcctgcaa
cgccgcaccgaccggctcacgctgcacgacagggaggtcttcgcggccaccgtcggcggc
atccgggtggtcgaaccggccgccgacctcgcggtggcgctcgcggtcgcctccggcggc
atcaacctggccatcgcgccgcacctggtcgcgatcggggaggtggggctcaccggcgag
gtgcggcgggtgggtgccgttccgcgccggctggccgaggcggcccggctgggcttccgg
tacgccctggtgccacccggctgcggccccgaggcgaccggcatcaagccggacgggatg
cggatcaccgaggtgggcgacgtccgtacggcgctgaacatggccgcccgactctccgtc
gacgactga
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