Plantactinospora sp. KBS50: CIK06_27510
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Entry
CIK06_27510 CDS
T05048
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
plk
Plantactinospora sp. KBS50
Brite
KEGG Orthology (KO) [BR:
plk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
plk03032
]
CIK06_27510
03400 DNA repair and recombination proteins [BR:
plk03400
]
CIK06_27510
Enzymes [BR:
plk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CIK06_27510
DNA replication proteins [BR:
plk03032
]
Prokaryotic type
DNA Topoisomerases
CIK06_27510
DNA repair and recombination proteins [BR:
plk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CIK06_27510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
ASW58064
UniProt:
A0A248YWI2
LinkDB
All DBs
Position
complement(6351099..6352076)
Genome browser
AA seq
325 aa
AA seq
DB search
MRLRRSDLDRAGHGRRRRGRGFSYVDRAGRLLGPVDVGRIRELVIPPAWTDVWICPHPNG
HIQATGVDAAGRKQYLYHPQWRAKRDEAKFDHVLEVARHLPELRKRVAADLAERGLCRSR
VLATITRLLDMGMFRVGSDEYAVGEEPTFGLATLRPEHARRQSGCVVLEFPSKGGVEQVR
RIAAPEVCAVLADLRRRRRGADRLFAYWVGRQWRDVRADDVNGYLRENAGTEMTAKDFRT
WHATVLAARRLAAAGPKSAESARRRAVAGVMREVSELLGNTPTVARASYVDPRVVQRYAG
GRVLRIAADTPVEGVEAAVLELLTA
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
gtgcggctgcggcgtagcgacctcgaccgggccggccacggccgtcgccggcggggcagg
ggcttctcgtacgtcgaccgggcggggcggctgctcgggccggtcgacgtcggccggatc
cgggagctggtcatcccgccggcctggaccgacgtctggatctgcccgcaccccaacggg
cacatccaggcgaccggggtggacgcggccggccgcaagcagtacctctaccacccgcag
tggcgggcgaaacgcgacgaggccaagttcgatcacgtcctggaggtggcccggcacctg
ccggagctgcgcaagcgggtggccgcggacctggccgaacggggtctgtgccggtcccgg
gtgctggcgaccatcacccggctgctggacatgggcatgttccgggtgggcagcgacgag
tacgcggtcggcgaggagccgacgttcggcctggccacgctgcgcccggagcacgcccgg
cggcagtccggatgcgtggtgctcgaattcccgtccaagggcggggtcgagcaggtccgc
cggatcgccgcgccggaggtctgcgcggtgctggcggatctgcggcggcgccggcgcggc
gccgaccggctgttcgcgtactgggtcggccggcagtggcgggacgtgcgggccgacgac
gtcaacggctatctgcgggagaacgccggcaccgagatgacggccaaggacttccgcacc
tggcacgccaccgtgctggccgcccgccggctcgcggcggcggggccgaagtccgccgag
tccgcccggcgccgggcggtggccggggtgatgcgcgaggtctcggagctgctgggcaac
accccgaccgtggccagggcgtcgtacgtggatccgcgggtggtgcagcggtacgcgggc
ggccgggtgctgcggatcgcggccgacacgccggtggagggcgtcgaggccgccgtcctg
gagctgttgacggcctga
DBGET
integrated database retrieval system
