Planococcus versutus: I858_005240
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Entry
I858_005240 CDS
T04421
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
pll
Planococcus versutus
Pathway
pll03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pll00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I858_005240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pll03019
]
I858_005240
03009 Ribosome biogenesis [BR:
pll03009
]
I858_005240
Enzymes [BR:
pll01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
I858_005240
Messenger RNA biogenesis [BR:
pll03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
I858_005240
Ribosome biogenesis [BR:
pll03009
]
Prokaryotic type
rRNA helicases
I858_005240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
GRP
Helicase_RecD
AAA_22
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ANU26426
UniProt:
A0A1B1RZS2
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All DBs
Position
493262..494728
Genome browser
AA seq
488 aa
AA seq
DB search
MGFEEATPIQEGTIRLGMEGKDIIGQAQTGTGKTTAFGIPLIEKIDTKDGNVQGLVIAPT
RELAIQVSEELYRLGQDKNVRILSVYGGQEISRQIRALKNRPQVIVGTPGRLLDHINRRT
LKLDNVNTLILDEADEMLNMGFIEDIQTIMASVPDTRQTLLFSATMPDAIRRIAEKFMKT
PEVVKIKSKEMTVENIEQFYVKSVEREKFDFLSRLLNVQQPELAIVFGRTKRRVDELAKA
LNIRGYLAEGIHGDLSQAKRMSVLKQFKAGKIDILVATDVAARGLDISGVSHVYNFDIPQ
DPESYVHRIGRTGRAGKKGVAVTFVTPREMGYLSIVERTTKKKMEALVPPTANEAVLGQK
RVAMEQLFEMTEKNNLGDYREFATQMLEKHDAVDLIAAALKTMTKEPEDVPVSISEERPL
PSRGGGGYKGKSGSGRSGGGGGYKGNRSSSSARPSSSRGASSGASRRREGGSGTGGGRPG
RTTRRSES
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggggtttgaagaagcaacaccaattcaagaaggtacaatccgtcttggaatggaaggc
aaagacattattggacaagcacaaacaggtacaggtaaaacaactgcatttggtattcct
ttgattgaaaaaatcgacactaaagacggtaatgttcaagggttagttatcgcaccaaca
cgcgaattggcaatccaagtttcagaagaactttacagattgggtcaagataaaaacgta
cgcattctttcagtatacggcggccaagaaattagccgacaaatccgtgcacttaaaaac
cgtccgcaagttatcgttggtactccaggacgtctattagaccatatcaaccgccgtaca
cttaaattggataatgtgaatacgttaatccttgatgaagcagacgaaatgttgaacatg
ggctttatcgaagacattcaaacaattatggcaagtgttcctgatacgcgtcaaacattg
ttgttctcagcaactatgccggatgcaatccgtcgcattgcagagaaattcatgaaaact
cctgaagttgttaaaatcaaatcaaaagaaatgactgttgaaaatattgagcaattctac
gtgaaatctgtagagcgcgagaaattcgatttcctttcacgtcttttgaatgttcaacaa
ccagaacttgcaattgttttcggccgtacaaaacgccgtgttgacgaattagcaaaagct
ttgaatatccgcggctatcttgctgaaggaattcatggtgacttgagccaagcaaaacgt
atgtctgttttgaaacaatttaaagctggcaaaatcgatatcttggtagcaacagatgta
gcggctcgcggacttgacatctctggtgtatcacacgtatacaactttgatattccgcaa
gatcctgaaagctatgttcaccgtatcggccgtacaggtcgtgcaggtaaaaaaggtgtc
gcagtcacgtttgttacaccacgtgaaatgggctacttgagcatcgttgaacgcactaca
aagaaaaaaatggaagcattagttcctccaactgcgaatgaagctgtacttggccaaaaa
cgcgttgcaatggaacaattgtttgaaatgacagagaaaaacaatcttggcgattatcgc
gaattcgcgacgcaaatgcttgaaaagcacgatgcggttgatttgattgcagcagctctt
aaaacaatgactaaagaaccggaagatgttccagtctctatttccgaagaacgtcctttg
ccatcacgcggaggcggcggttataaaggcaagagcggaagcggacgcagtggcggaggc
ggcggctataaaggcaatcgttcttcaagctcagctcgtccatcttcaagccgtggagca
agctcaggcgcaagccgtcgtcgtgaaggcggaagcggaacgggtggcggacgtccggga
cgtacgactcgtcgtagcgaatcttaa
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