Planococcus versutus: I858_010720
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Entry
I858_010720 CDS
T04421
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
pll
Planococcus versutus
Pathway
pll03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pll00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I858_010720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pll03021
]
I858_010720
03019 Messenger RNA biogenesis [BR:
pll03019
]
I858_010720
Transcription machinery [BR:
pll03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
I858_010720
Messenger RNA biogenesis [BR:
pll03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
I858_010720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
S1CSD-TOTE-2
OB_RNB
AAA_22
ATPase_2
AAA
AAA_25
NACHT
Motif
Other DBs
NCBI-ProteinID:
ANU27461
UniProt:
A0A1B1S2P9
LinkDB
All DBs
Position
complement(2661155..2662438)
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AA seq
427 aa
AA seq
DB search
MATITISALENMTLKELYNLAKEYKLTNYSKLSKKELIFAILKTRAEQEGFFFMEGVLEI
IQSEGFGFLRPINYSPSSQDIYISASQIRRFDLRNGDKVSGKVRPPKENERYFGLLQVEA
VNGEDPEVAKERVHFPGLTPLYPDRHIRLETTPAHLSTRIMDLVAPVGFGQRGLIVAPPK
AGKTMLLKEIANSITTNHPEAELIVLLIDERPEEVTDIERSVNADVVSSTFDEVPENHVK
VAELVLERAMRLVEHKRDVVILMDSITRLARAYNLVIPPSGRTLSGGIDPAAFHRPKRFF
GAARNIEEGGSLTILATALVETGSRMDEVIYEEFKGTGNMELHLDRSLAERRIFPALDIR
RSGTRKEELLIEPKQLEKLWSIRKTFSDSHDFGERFLKKLSQTDTNEEFFEQLTTEMKTH
RNNKKMI
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgataacaatctccgcattggagaatatgacattaaaagaactttataattta
gcgaaagaatacaaactaacaaactacagcaagctttcaaaaaaagaactaatttttgcg
attttaaaaacacgcgcagaacaagaaggttttttctttatggaaggtgtacttgaaatt
attcaatctgaaggttttggttttttacgaccaattaactactcgccaagctcgcaagat
atttacatttcggcttctcaaattcgtcgttttgatttgagaaacggtgacaaagtttca
ggaaaagtgcgtccgccaaaagaaaacgaacgctactttggcttgcttcaagtggaagcg
gtaaatggagaagacccagaagtagcaaaagaacgtgttcactttccaggacttacacca
ctttatccagatcgacacattcgtttagaaaccacacctgctcatttatccacacgcatt
atggatttagtggcacctgttggatttggccagcgcggcttgatcgttgcgccacccaaa
gcaggcaaaacgatgttgttaaaagaaatcgctaactccattacaaccaatcatccagaa
gcggaattaattgttttactaattgatgaacgtccagaagaagtaacggacatcgagcgt
tctgttaacgctgatgtcgtttcatccacttttgatgaagtgcctgaaaatcatgtaaaa
gtagcagagcttgttctagaacgcgctatgcgccttgttgaacacaaacgcgatgttgtt
attttgatggactcgatcacgcgtttagcgcgagcgtataatttagtaattccgccaagt
ggtcgtactctgtcaggaggaattgacccagctgctttccaccgaccaaaacgttttttc
ggtgcagcgcgtaacattgaagaaggcggaagcttaacaattttagctactgctttagtt
gaaacaggatcacgtatggacgaagttatttacgaggagtttaaaggaacgggtaatatg
gaattgcatctggatcgctctttggcagaacgtcgaattttcccagcactggatattcgc
cgttcgggtacacgtaaagaagaattgttaattgaacctaagcaacttgaaaagctttgg
tcgattcgaaaaaccttttcagattcgcatgactttggcgaacgtttcttaaagaaattg
agccaaacagataccaacgaggaattttttgaacaattaactacggaaatgaaaactcat
cgaaacaacaagaagatgatctaa
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