Planococcus versutus: I858_013315
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Entry
I858_013315 CDS
T04421
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pll
Planococcus versutus
Brite
KEGG Orthology (KO) [BR:
pll00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pll03032
]
I858_013315
03400 DNA repair and recombination proteins [BR:
pll03400
]
I858_013315
Enzymes [BR:
pll01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
I858_013315
DNA replication proteins [BR:
pll03032
]
Prokaryotic type
DNA Topoisomerases
I858_013315
DNA repair and recombination proteins [BR:
pll03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
I858_013315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_RPB9
DUF2996
Toprim_4
SHD1
Motif
Other DBs
NCBI-ProteinID:
ANU27966
UniProt:
A0A1B1S452
LinkDB
All DBs
Position
complement(2100807..2102876)
Genome browser
AA seq
689 aa
AA seq
DB search
MADFLVIVESPAKAKTIERYLGKKYKVRASLGHLRDLPRSQMGVDVENNYEPRYITIRGK
GPILQDLKKEAKKAKKVFLAADPDREGEAIAWHLATALGIDQTSDCRVVFNEITKDAIKE
SFKHPRKIDMDLVDAQQARRILDRLVGYSISPLLWKKVKKGLSAGRVQSVALRLVIDREN
EIKSFEPEEYWSITGEFEKAKKKFEAQFYGNTKEKVKLHNEADVKAVMASMSGKDFTVNR
VVKKERKRNPSPSFTTSSLQQEAARKLNFRAKKTMMLAQQLYEGISVGKEGITGLITYMR
TDSTRISDTAKKDTMDFIVENYGEEYVTQKAPAKQSAKSQDAHEAVRPTSVMRTPESMKS
ILSRDLHRLYKLIWDRFVASQMSSAVLDTVMAELQNGDAVFRANGSQVKFAGFMKLYIEG
TDDQKEEKDNILPEMVEGDIVKAVDVLPNQHFTQPPPRFTEARLVRALEELGIGRPSTYA
PTLDTIQKRGYATLDAKRFIPTELGEIVHQLVLEFFPDILNIEFTAKMEHDLDTVEDGEI
EWRTIIDAFYKKFEKNVEVAENEMEKVQIKDEPVGEDCELCGSPMVYKLGRYGKFMACSN
FPECRNTKAIVKHIGVTCPTCKEGEIVERKSKKRRIFYGCERYPECEFVSWDKPIERPCP
KCDKLLVEKKVKKGVQINCTNCDYKEEVQ
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggcggattttttagtgattgttgagtcgcctgcaaaggctaagacgatcgaacggtat
ttgggtaagaaatataaagtccgtgcttcacttggacatttacgcgatttgccccgaagt
caaatgggtgtagacgtggaaaacaattatgaacctcgttacattacgataagaggtaaa
ggacctatcctacaagatcttaaaaaagaagcaaaaaaggcaaaaaaagtctttctagct
gctgaccccgatagagagggagaagcaattgcatggcatttagcgacggcgctcggtatt
gatcaaacttcagattgtcgcgttgtttttaacgaaatcacaaaagatgccattaaagaa
tcttttaagcatccacgcaaaattgatatggacttagtcgatgcgcaacaagcacgccgg
attttagatcgcctagtggggtacagcatcagcccgttgctttggaagaaagtaaaaaaa
ggattatcagctggacgcgtacaatcagtggcactgcgtttagtcattgatcgcgaaaat
gaaatcaaaagttttgaaccagaagaatactggtcaattactggagaatttgaaaaagcg
aaaaagaaatttgaagcacaattttatggcaatactaaagaaaaagtaaaactacacaac
gaagcagacgtcaaagctgttatggcttctatgtctggtaaagactttacagttaaccgc
gtagtgaaaaaagaacgaaaaagaaatccatctccttcttttacaacttcttcacttcaa
caggaagctgctcggaaattaaatttccgagcgaaaaagacgatgatgctagcacagcaa
ttatacgaaggaatctctgtcggtaaagaaggcatcacgggcttgattacgtacatgcga
acggattctacacgaatctctgatacggcaaaaaaagatacgatggactttatcgtcgaa
aactacggcgaagaatacgtgacgcaaaaagcaccagctaagcaatcagcaaaatcacaa
gacgcccacgaagcagttcggccgacaagcgtcatgagaacgccagaatcgatgaagagt
attttatcacgtgatcttcatcgtttatacaaattgatttgggatcgatttgtagcaagt
caaatgtcatctgccgttttagatacggttatggcggagttgcaaaatggcgatgcggtg
tttcgtgcaaatggatcgcaagtcaagttcgcaggctttatgaaactttatattgaaggg
acagacgatcaaaaagaagaaaaagataacatactgccagaaatggttgaaggagatatt
gtaaaagcggttgatgttctacccaatcagcattttacgcaaccacctccacgctttaca
gaggctcgcttagtaagagcgcttgaagagttgggaatcggacgtccatcaacttacgcg
cccacactagacaccattcaaaagcggggttacgcaactttagatgcgaaacgttttatt
ccgactgagttgggtgaaattgttcatcaactggtactcgaatttttcccggatattttg
aacatcgagtttactgcaaaaatggaacatgatttagatactgttgaagatggagaaatt
gaatggcgcaccattatcgatgcattttataagaaatttgaaaagaatgttgaagtagca
gaaaatgaaatggaaaaagtacaaatcaaagatgagccagtaggtgaagattgtgaattg
tgtgggtcgcccatggtttataaattaggacgctacggcaagtttatggcttgtagcaat
ttccctgaatgccgtaatacgaaagcaatcgttaagcacataggtgttacatgtccgaca
tgtaaagaaggcgaaatcgttgaaagaaaaagtaaaaagcgccgcattttctatggctgc
gagcgttatccagaatgcgaattcgtttcttgggataaaccaattgaacgtccatgtccg
aaatgcgacaaattgcttgtagagaaaaaagtgaaaaaaggtgttcaaatcaattgcaca
aattgtgattataaagaagaagttcaataa
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