Planctopirus limnophila: Plim_0008
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Entry
Plim_0008 CDS
T01225
Name
(GenBank) RNA polymerase sigma factor, sigma-70 family
KO
K12132
eukaryotic-like serine/threonine-protein kinase [EC:
2.7.11.1
]
Organism
plm
Planctopirus limnophila
Brite
KEGG Orthology (KO) [BR:
plm00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
plm01001
]
Plim_0008
Enzymes [BR:
plm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
Plim_0008
Protein kinases [BR:
plm01001
]
Serine/threonine kinases: Other
Bacterial family
Plim_0008
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Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
Sigma70_ECF
ABC1
APH
RIO1
TCAD9
HTH_Tnp_ISL3
Sigma70_r4_2
HTH_11
Kinase-like
HTH_28
HTH_23
HTH_24
GerE
Sigma70_r4
Motif
Other DBs
NCBI-ProteinID:
ADG65861
UniProt:
D5SME1
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Position
9261..10766
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AA seq
501 aa
AA seq
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MEAVCSGDEKLDEKADMPEPENLKIDLHDQSGVELVKLWASGNQDAAQILVARYQIRLMA
MISARLSAQYRHRIATEDVVQSALVSFFRTARHQTERSVIPTSTKSVWDLLALFARRKLS
RAIERESASKRGGHWKRYSLEQFEHSFPVSPGSQELEELLIDLRSQLDDSQSQLLELLLQ
NATQKEIAQQCAVDERTIRRRLMALRNLIAEQWAGEFSFPTKELRFSPTISLPQITYGQF
VLGKLVGRGALGKVYRARWQPHGQLMAVKFMHRDLWKQPESQDSFLREIDLASKIHHPGI
IRYLGWGRSPHGGPYLLSEYIDGSALTKCSIADAPTRWKRFIDICDAMAAAHQSGVIHGD
LTPANILIAHDGRVVVTDFGFATQSYSKTENDHADLNFISPGGTIGFAAPEQISTAFGNI
SPATDIYALGALAFYLLFGRGPHQKIEQSIVDTLDEENVVIKETQTTAEETRLAKVVNRA
LKKAVRDRPQSIAELLDGMRG
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
ttggaagccgtctgctcaggagatgagaaactggacgaaaaagcggacatgcctgaacca
gaaaatctgaaaatcgatctacacgatcaatctggtgtggaactggtcaaactttgggct
tcagggaatcaagacgctgcgcaaatactggttgcgcggtatcagattcgacttatggcc
atgatcagtgctcgcttatcggcgcagtatcgccatcgaatcgcgacagaagatgttgtg
cagtcagcactggtgagtttcttccgtacggctcgccatcaaacagaacgttcagtcatt
ccgacatcaacgaaatctgtctgggatcttctcgctctcttcgcccgccgcaagttatcc
cgagcgatcgaacgagaaagcgccagcaaaagaggtggtcactggaagcgatactcatta
gagcagttcgaacacagtttcccagtttcgcccggttctcaggaacttgaggaactgctg
attgatctccgctcacagttggacgatagccaatcacagcttcttgaacttctcctgcaa
aatgcgactcagaaagaaattgcacagcaatgcgctgtcgatgagaggaccattcgccgg
cgcttaatggctttgcggaacctgatcgccgaacagtgggcaggtgagttttcattcccc
accaaagaactacgattcagtccaacgatttcgctacctcagatcacctatggacaattt
gtacttggaaagctggtcgggagaggggctcttggaaaagtttatcgagccagatggcag
ccacacggtcaattgatggctgtgaaattcatgcaccgcgatctatggaaacaacctgag
tcgcaggattcctttctccgggaaattgatctcgcttcaaagattcatcatccgggcatc
atcagatatcttggctggggaaggtctcctcacggcgggccctatcttttaagcgaatac
attgatggttccgcattgacgaagtgctcaatcgctgatgctccaactcgatggaagcgg
ttcattgacatttgcgacgcaatggcagcagctcatcagtcaggtgtcattcatggtgat
ctcacacccgccaacatcctgattgcgcatgatggtcgtgtcgttgtcactgatttcggg
tttgccacgcaaagctattcaaaaacagagaacgatcacgcagacttaaacttcatctcg
cccggcggaacaattggttttgctgcacctgagcagatttcgaccgcctttggaaacatc
agcccagcgacagacatctatgccctcggggctctcgcgttctatctactttttggcagg
gggccacaccagaaaatcgagcaatcgattgtcgatacgcttgatgaagaaaatgtcgtc
attaaggaaacacaaaccactgccgaagaaaccaggttggcgaaagtcgtcaaccgagca
ctcaagaaagccgtcagggatcgccctcagtcgattgctgaactcctcgatggcatgaga
ggttag
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