Planctopirus limnophila: Plim_0116
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Entry
Plim_0116 CDS
T01225
Name
(GenBank) L-serine dehydratase 1
KO
K01752
L-serine dehydratase [EC:
4.3.1.17
]
Organism
plm
Planctopirus limnophila
Pathway
plm00260
Glycine, serine and threonine metabolism
plm00270
Cysteine and methionine metabolism
plm01100
Metabolic pathways
plm01110
Biosynthesis of secondary metabolites
plm01200
Carbon metabolism
plm01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
plm00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Plim_0116
00270 Cysteine and methionine metabolism
Plim_0116
Enzymes [BR:
plm01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.1 Ammonia-lyases
4.3.1.17 L-serine ammonia-lyase
Plim_0116
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Paralog
Gene cluster
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Motif
Pfam:
SDH_alpha
SDH_beta
PT-VENN
Motif
Other DBs
NCBI-ProteinID:
ADG65969
UniProt:
D5SN42
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All DBs
Position
158867..160249
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AA seq
460 aa
AA seq
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MYVSVFDLFKVGIGPSSSHTVGPMKAAQIFAQRLVDQGHLEKLGMVQAHLFGSLALTGKG
HATDSAVIWGLAGEMPATAQSENLARILDRVQKEHRLPIGGTDHEIEFLPDRDIFFHYNE
VLPQHPNGMKFVALDKNGLPLAMESAFSVGGGFVIFEGEDQAQTSTSPQVEILFPFTTAA
ELLEIGIREKKSIAAIVRENERAFRTDAEIDAGLDRIWEVMQSSIDRGCRTEGILPGGLN
VKRRAASMCRTLMTSGPRPIDPLQSLDWVSLFALAVNEENAAGGQVVTAPTNGAAGVIPA
VIAYYKRLLAGATQEGVRTFLLTAGAIGMLYKRNASLSAAEMGCQGEVGVACSMAAGGLA
AVMGGSNEQIENAAEIGMEHNLGLTCDPIKGLVQVPCIERNTMGAAKAINAARLAVLHGD
GTHRVSLDRVIETMRQTGVDMQVKYKETSIGGLAVNVVDC
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgtatgtcagcgtgtttgatctgttcaaagtagggattggaccgtccagttctcacacc
gtcggccctatgaaggcggctcaaatctttgctcagcgactggttgaccagggccacctg
gaaaagctggggatggtgcaggctcacctgtttggttcgctggcactcaccggcaaaggc
cacgcgacagattcggcagtcatctggggactggctggtgaaatgccggcgacagcccag
tccgagaatctcgccagaattcttgatcgagtccagaaggaacatcgccttcccatcgga
gggacagatcacgagatcgagttcctccccgatcgggacatcttcttccattataatgag
gtgttgccacaacaccccaacggcatgaagttcgtcgcactcgacaaaaatggcctccca
ctggcgatggagagtgcgttctccgtcggcggcggattcgtcatttttgaaggggaagac
caggcacagacatcaacctcaccacaagtcgaaatcctcttccccttcacgacggctgcc
gaacttctcgaaatcggtatccgtgagaaaaagtcgattgctgccattgtccgcgagaat
gaacgagccttccgcacggatgctgagatcgatgccggcctcgaccgcatctgggaggtc
atgcaaagttccatcgatcgaggttgccgcaccgaagggattcttcctggtggcctgaac
gtcaaacgccgtgccgcgagcatgtgccgcacactcatgacctctggtcctcgtccgatt
gatccgctgcaaagcctcgattgggtgagtctgtttgcactcgccgtcaatgaagaaaac
gctgccggtggtcaggtggtgacagcacccacaaatggagcagccggagtcattcctgct
gtgattgcttattacaaacgtttattggcaggtgccacacaggaaggtgttcgcaccttc
ctgttgacggcaggtgccattggtatgctctataagcgtaatgcctcactctctgctgcc
gagatgggttgtcagggtgaagtgggcgtcgcctgttcaatggctgccggtggcctggct
gccgtcatgggtggctcgaacgaacagatcgagaacgctgcggaaattggcatggagcat
aacctgggcctgacctgcgatcccatcaaaggtctcgtgcaggttccgtgcatcgaacgc
aacacgatgggggctgccaaagccattaatgccgcccggctcgctgtgctgcatggagat
ggcacccaccgcgtctcgctcgaccgcgtcatcgaaaccatgcgccagacaggtgtcgat
atgcaggtcaaatacaaggaaacctccattggaggacttgcagtcaacgtcgttgattgc
tga
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