Planctopirus limnophila: Plim_0185
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Entry
Plim_0185 CDS
T01225
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
plm
Planctopirus limnophila
Pathway
plm00300
Lysine biosynthesis
plm00470
D-Amino acid metabolism
plm01100
Metabolic pathways
plm01110
Biosynthesis of secondary metabolites
plm01120
Microbial metabolism in diverse environments
plm01230
Biosynthesis of amino acids
Module
plm_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
plm00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Plim_0185
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Plim_0185
Enzymes [BR:
plm01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
Plim_0185
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Gene cluster
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Motif
Pfam:
DAP_epimerase
Pro_racemase
Tt1219-like
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
ADG66037
UniProt:
D5SNB0
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All DBs
Position
complement(239833..240675)
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AA seq
280 aa
AA seq
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MRFTKMHGIGNDYVYVNLFAEKLPLAAPDLARIVSNRYKGIGGDGLILIGPSERGDARMQ
MFNADGSESEMCGNGVRCVAKYVYDHGIAKKPELRIETGRGVLTLQMFAGSSGKAERVRV
NMGTPILKSADIPTALPGDPPVNQPLVVGDKTISVTCVSMGNPHCVTFVDELTDAWVLGL
GPQVEVHAAFPRRVNAEFAQVLSRTEIQLRVWERGSGETQACGTGACATLVAGVLSGRTD
HQALIHLPGGDLEIEWPDEKEVFMTGPATEVFTGEWFPEV
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttcactaaaatgcatggaatcggcaatgattacgtctatgtgaatctgttcgca
gagaaacttccgctcgctgcgcccgatttggcccgaatcgtttcgaaccgctacaaggga
attggtggcgacgggctgatcctcattggcccatccgaacgcggcgatgcccgcatgcag
atgttcaatgccgacggcagcgaatcggaaatgtgcggcaacggcgttcgctgtgtggcc
aagtatgtctatgatcacggcattgccaaaaagcctgaactcagaattgagactggccga
ggtgtgttgactctccagatgtttgcgggctcttctggtaaggcggaacgtgtccgcgtc
aacatggggacaccgattctcaaaagtgctgatatccccacagcattgcccggggatccg
cctgtgaatcaaccgctggttgtgggcgacaaaaccatctccgtcacctgtgtttcgatg
gggaatccgcattgcgtgacatttgtggatgagctgacggatgcctgggtgctgggcctt
gggccgcaagtcgaagtgcatgccgcttttccacgccgggtgaatgccgagttcgcacag
gtcctttcgcggaccgaaattcaattgcgtgtctgggaacgtggcagtggtgaaactcag
gcgtgtggaacgggagcttgtgccacactcgtggcaggtgtgctctctggtcggactgac
catcaggcactgattcatcttcctggtggtgatctcgagattgaatggcccgatgaaaag
gaagtctttatgacgggccccgcgaccgaagtttttactggtgagtggttccctgaggtt
tga
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