Planctopirus limnophila: Plim_0334
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Entry
Plim_0334 CDS
T01225
Name
(GenBank) carbamoyl-phosphate synthase, large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
plm
Planctopirus limnophila
Pathway
plm00220
Arginine biosynthesis
plm00240
Pyrimidine metabolism
plm00250
Alanine, aspartate and glutamate metabolism
plm01100
Metabolic pathways
plm01110
Biosynthesis of secondary metabolites
plm01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
plm00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
Plim_0334
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
Plim_0334
00220 Arginine biosynthesis
Plim_0334
Enzymes [BR:
plm01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
Plim_0334
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
ATP-grasp
Dala_Dala_lig_C
ATPgrasp_Ter
GARS_A
ATP-grasp_5
ATP-grasp_2
ATP-grasp_3
Motif
Other DBs
NCBI-ProteinID:
ADG66185
UniProt:
D5SP30
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All DBs
Position
413821..417093
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AA seq
1090 aa
AA seq
DB search
MPRRDDLKKILIIGSGPIVIGQACEFDYSGTQACKALRECGYEVVLVNSNPATIMTDPNT
ADSTYIEPIHWQYVAKIIENERPDAILPTLGGQTGLNTGMELFRRGILEKYNCEMIGARA
DVIEKAEDRQLFKEAMQKIGLDVCRSRIVNSMEEARDVLKEIGLPIIIRASFTLGGMGGG
IAYNREEFEEKVRKGIELSPINEVLLEESIIGWKEYEMEVMRDKADNVVIICSIENLDPM
GVHTGDSITVAPAQTLTDREYQRMRDATIAVMREIGVETGGSNVQFAIHPQTGRMVVVEM
NPRVSRSSALASKATGFPIAKIAAKLAVGFTLDEIPNDITRETLACFEPTIDYVVTKVPR
WTFEKFPEADPELTVQMKSVGETMAIGRTFKESLQKALRGLEIGHFGLGGGKKDLWDSDH
RPTIEEIEGKLATPNDMRIFYLRYAMKAGLSNSEIHDLTKIDPWFLENIRDIVRMEDRLR
CHERLDQVSDELLREVKRYGFSDKQIGDWLDVSDMEVRRERKRRGILPTFKQVDTCAAEF
EAYTPYYYSTYESEDEAPGPRTDGRQRVIILGGGPNRIGQGIEFDYCCCQASFALRELGI
ESVMVNSNPETVSTDYDTSDLLFFEPLTTEDVLNICDRLQPDGVIVQFGGQTPLNLARGL
EQAGVKIIGTSPSMIDAAEDREIFKGILDKLGLHQPPNGMATDAARAVQIASEIGYPVLV
RPSFVLGGRAMQICYDERMVREYMTEAVNVSPDRPVLIDKFLEDAVEVDVDAISDGEITV
VGGVMEHIEEAGVHSGDSACVLPPYSLPDAIVDEIKTATYALAKELQVRGLMNIQFAVKH
QGGEPVVYVLEVNPRASRTSPFVSKATNVPLPKLAAKIMVGKTLKELGFTKEVVPPYVSV
KESVFPFTRFAGVDIILGPEMKSTGEVMGIDSTFPAAYARSQLGAGNKLPSSGAVFISLA
GRHKEHIISSARRLIDMGFKILATSGTSRVLREAGIEVETVRKLQEGRPNLLDYMANNQV
QLVFNTPSGKGARSDEGRIRAAAVMNGIPCVTTLPGCIAVVQALESIQESPEPSVTSLQQ
WIAQLPASKA
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
gtgccccgccgcgacgacctcaagaagatactcattattggttcgggccctattgtcatc
gggcaggcatgtgaattcgattattcagggactcaggcctgcaaagccttgcgcgagtgt
ggatacgaggtggtcctcgtcaattccaaccccgccacaatcatgacggacccgaatacg
gctgattccacctacatcgagccgattcactggcagtatgtcgcgaaaatcatcgagaac
gaacgtcccgatgcgatcttgccgacgctgggcggtcagacgggtctgaataccggtatg
gaactgtttcgccggggcattctcgaaaaatacaactgcgagatgattggggctcgcgcg
gacgtcattgaaaaggccgaagatcgccaactcttcaaggaagcgatgcagaagatcggg
ctcgatgtctgtcgcagccggatcgtcaactcgatggaagaggcccgcgacgttctcaaa
gaaatcggcctccccattatcattcgcgccagttttactctcggcggcatgggtggtggt
atcgcttacaatcgcgaagaattcgaagagaaggttcgcaaagggattgaactctctccg
atcaatgaagtcctccttgaggaatcgatcattggctggaaagagtacgagatggaagtg
atgcgggataaggccgacaacgtcgtcattatctgctccatcgagaacctcgacccgatg
ggtgtgcataccggcgattcgatcaccgtcgcacctgctcagacactgaccgaccgtgaa
tatcagcgcatgcgtgatgccacgattgccgtcatgcgggaaattggcgtggagaccggt
ggctcgaatgtccagttcgccattcatccacagaccggccgtatggtcgtggtggaaatg
aatccgcgcgtcagtcgctccagtgcactggcttcgaaggcgacgggtttcccgattgcc
aaaattgctgcgaagctcgccgtcggcttcacacttgatgaaatccccaatgacattacc
cgggaaacgctcgcctgctttgaaccgacgattgattatgtcgtcaccaaggttccccgc
tggacattcgaaaaatttcccgaagccgatcctgaactcaccgtgcagatgaagtcagtc
ggcgaaacgatggccattggccgtactttcaaagaatcactgcagaaggcgctgcgcggg
ctggaaattggccacttcggcttaggtggcggcaagaaagatctttgggattccgatcac
cgccccactatcgaagagatcgaaggcaagctcgccactcccaacgacatgcggatcttt
tatctccgttatgcgatgaaggccggtctgagcaactccgaaatccacgatctcaccaag
atcgacccatggtttcttgaaaacattcgcgacattgtccggatggaagaccgcctgcgc
tgtcatgagcgacttgaccaggtcagtgatgaactgctgcgagaagtcaaacgctacggc
ttctccgacaagcagattggcgactggctcgatgtctcggatatggaagtccggcgcgaa
cgcaagcggcggggcattcttcccacgtttaagcaggtcgatacctgtgctgcggaattc
gaagcttatacgccttattactactcgacctacgaatcggaagacgaagccccgggcccc
cgcaccgatggtcgtcagcgagtcatcattttaggtggcggcccgaaccggattggccag
gggatcgaattcgattactgctgctgccaggcctcgttcgcacttcgcgaactgggtatt
gaatcggttatggtcaattccaatccggaaacggtctcgactgattatgacacttccgat
ctgctcttctttgaaccactcacgacggaagacgtgctgaatatttgcgatcgccttcag
cccgatggcgtgattgttcaattcggtgggcagacacccctcaacctggcccgtggtctt
gaacaagcgggcgtgaagatcatcggcacaagtccctcaatgattgatgccgcggaagat
cgcgagatcttcaagggaattctcgacaagctgggattgcaccagccacccaacggcatg
gcgaccgatgccgctcgcgctgtgcagattgccagtgaaattggttatcccgtcctcgtc
cgccccagctttgtgctgggtggccgggccatgcagatctgttacgacgagcgcatggtg
cgcgaatacatgacagaagccgtcaatgtttcacccgatcgtccagtgctcatcgataag
ttcctcgaagacgcggtcgaagtcgatgtcgatgccatttctgatggtgaaatcacagtg
gtgggcggggtcatggagcatatcgaagaagcgggcgttcactcaggcgattcggcctgt
gtgctgccgccttattccctccccgacgccattgtcgatgaaatcaaaacggccacttat
gcactggccaaagagctgcaggtacgcggcctgatgaatatccagttcgccgtcaaacac
cagggtggcgagcccgtcgtctatgttcttgaagtcaatccgcgggcgagccgcacctcg
cctttcgtgagcaaagccacgaacgtccccttgccgaagctggcagccaagatcatggtt
ggcaaaaccttgaaggagctgggcttcactaaggaggttgtgccgccttacgtttcggtc
aaagagagcgtcttcccgttcactcgctttgctggtgtcgatatcatcctcgggcccgag
atgaaatcgaccggcgaagtcatgggcatcgactcgacattcccagctgcttatgcccgg
tctcaactgggtgccgggaataagctcccttcgagcggagccgtctttatcagtctcgcc
ggccgacacaaagagcacatcatcagcagtgcccggcggctgattgatatgggcttcaag
attctggcaacctcagggacttcgcgtgttctgcgcgaagcagggatcgaagtcgagaca
gttcgtaaattgcaggaaggtcgcccgaacctgctcgattacatggcgaataaccaggtt
caacttgtctttaatacacccagtggaaagggtgcccgttctgacgaaggccgcattcgt
gctgccgctgtcatgaatggcatcccctgcgtcaccacgctgcccggttgtattgccgtg
gtgcaggccctggaatcgattcaggaatcgcctgaaccgagcgtgacttcattgcagcag
tggattgctcagttgcctgccagcaaagcgtaa
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