Planctopirus limnophila: Plim_0407
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Entry
Plim_0407 CDS
T01225
Name
(GenBank) type II secretion system protein
KO
K02653
type IV pilus assembly protein PilC
Organism
plm
Planctopirus limnophila
Brite
KEGG Orthology (KO) [BR:
plm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
plm02044
]
Plim_0407
02035 Bacterial motility proteins [BR:
plm02035
]
Plim_0407
Secretion system [BR:
plm02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
Plim_0407
Bacterial motility proteins [BR:
plm02035
]
Pilus system
Pilus assembly proteins
Plim_0407
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
T2SSF
DpnD-PcfM
DUF3295
Motif
Other DBs
NCBI-ProteinID:
ADG66257
UniProt:
D5SPM7
LinkDB
All DBs
Position
complement(510626..511885)
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AA seq
419 aa
AA seq
DB search
MPTFMYEAMDNKGMEVKDTIEAATEQEAQSKIRERGFYVTKISEKGRTKKKKDTSPAKDG
KKKPNARKKGTFTIGGVGAKQLCTFTRQLSTLQDAGLPILRSLRILEVQAKPGALKNSLM
GVIEDIESGSTLSEAMGKQPKAFDNLYVNMVRAGEAGGALEVILQRLAEFKERQQSLKRK
VQGAMIYPAAVITVATLIVGFIMYWIIPKFKKIFDDFGTKLPMMTEVLIGTSSAVVNYWY
LGPVIPISIWLLIKIIKKNKTGAFVVDWISLRIPMLGLILKKSIIARTCRTLGTLVASGV
PILEALSITRDTAGNAVFVKAFEHVNAAIREGESMAVPLRETKIYDEIVVNMVDVGEETG
ALDNMLYKVADVYDEEVGVLVEGLINMLEPLMVVVLGLIVGFIVIALFMPLIQLLNDLS
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgcccaccttcatgtacgaagcgatggacaacaagggcatggaagtcaaggatacgatt
gaagccgccaccgaacaggaggctcaatcgaagatccgcgagcgtggcttctatgtcacc
aagatctctgaaaaaggtcgcaccaagaagaaaaaagacacaagcccagccaaggatggg
aagaagaaacccaacgcccgcaagaagggaacgttcacgattggtggggtaggtgccaag
cagctttgcacctttacacggcaattgtcgacacttcaggatgctggtctacccattctt
cgaagtctgcgaattctggaagtgcaggccaagcctggtgcccttaagaactccttgatg
ggcgtcatcgaagatattgaatccggtagcactctatcggaagccatgggtaagcagccc
aaagcttttgataatctctacgtgaacatggtgagggccggtgaagcaggcggtgcgttg
gaagtgattctccagcgactcgcagaattcaaagaacggcagcaaagcctgaagcgtaaa
gttcaaggcgccatgatctacccggcagcggtgatcactgtggccacgttgatcgtgggc
ttcattatgtactggattatcccgaagttcaaaaagatcttcgacgacttcggtacgaaa
ctgcccatgatgacggaagtcttgatcggcaccagtagtgcggtcgtgaactactggtac
ctggggcccgtcattccgatttcgatctggctgctgatcaagattatcaaaaagaacaaa
accggggcctttgttgtcgactggatttcactccgcattcccatgctggggctgatcttg
aaaaagtcgattatcgcgagaacgtgccgcacgctgggaacactcgtggcctcaggtgta
ccgattctggaagcattgtcgattacccgtgataccgctggaaacgccgtgttcgtgaag
gctttcgagcacgtcaatgcggctattcgcgaaggggaatcgatggctgttcctctccga
gaaacaaaaatttacgacgagatcgtcgtcaatatggtcgacgtcggtgaagaaacggga
gcactcgacaacatgctctataaagtcgccgatgtctacgacgaagaagtgggcgtgctg
gtcgaaggtctgatcaacatgctcgaaccactcatggtcgtggtgctgggcttgattgtg
ggcttcattgtgattgccctcttcatgcctctgattcagttgctgaacgacctgtcctga
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