Planctopirus limnophila: Plim_0408
Help
Entry
Plim_0408 CDS
T01225
Name
(GenBank) type II secretion system protein E
KO
K02652
type IV pilus assembly protein PilB
Organism
plm
Planctopirus limnophila
Brite
KEGG Orthology (KO) [BR:
plm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
plm02044
]
Plim_0408
02035 Bacterial motility proteins [BR:
plm02035
]
Plim_0408
Secretion system [BR:
plm02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
Plim_0408
Bacterial motility proteins [BR:
plm02035
]
Pilus system
Pilus assembly proteins
Plim_0408
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
T2SSE
MshEN
AAA_22
AAA_16
nSTAND_NTPase5
AAA_14
AAA_29
nSTAND3
AAA_30
ATPase_2
cobW
AAA_7
AAA_11
AAA_23
AAA_19
ResIII
PatA_N
ABC_tran
NTPase_1
Rad17
PhoH
AAA
Microtub_bd
DEAD
MMR_HSR1
zf-C4pol
zf_Tbcl_5
Motif
Other DBs
NCBI-ProteinID:
ADG66258
UniProt:
D5SPM8
LinkDB
All DBs
Position
complement(512038..513750)
Genome browser
AA seq
570 aa
AA seq
DB search
MAQRKLGQILVDLGYISEDQLWDVLEEQKRSPGEIIGQVAIRMGLVTEAQVTEALAEQWG
MPVVNLGETTIPPRAIEMVPQTMAELYKIMPISLKDNVLTVAMADPQNVAALDDLRNFLG
AEVRGAISNLKDVEAAIARYYADKQDSIEDLITSMEESYGGTGGQNSREYNLDEAELADA
APIRKLLNMILLLAIKDQASDIHFEPFEDEFKVRVKADGMLYEMVPPPRHLANAIVSRIK
IMSDLDIAERRLPQDGRIELNVGGNSVDLRVSILPTLFGEAVVMRVLDRTVVQLDLNKIG
MDANTLTRFRSMIKRPNGIVLVTGPTGSGKTTTLYSALNELNDVETKIITTEDPIEYEIE
GLLQVPVNHDIGVTFATVLRAILRHDPDTILVGEIRDYETAEVSVQSALTGHLVFSTLHT
NDAPSAITRLRDMGVPPFLITACVEAVLAQRLVRRICTECRTKFDPSDELLMELQLPIQQ
ARKYNFYYGKGCQRCNNSGYKGRCGIYELLDVTDDIRDLIAASASVDDIRNFARSQGMTT
LREAGLKLIFDGVTTIDEIVRETITEDGEG
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggcacagcgtaaactcggacagattctggtcgacctggggtacatttcagaggatcaa
ctctgggatgtgctggaggagcagaagcgcagtccgggggagatcatcggccaggtagcg
atccgcatgggtctggtgaccgaagcacaggtcacagaagctctggcggaacaatggggg
atgccagtcgtcaatctgggagaaacaacaatcccaccccgcgccattgaaatggtgccc
cagacgatggctgaactttacaagatcatgcccatttctctgaaggataatgtgctgaca
gtcgccatggctgacccgcagaatgtggcggccctggatgatttgaggaattttctggga
gccgaagtccgcggtgcgatttcgaacttgaaggatgtcgaagcggctattgcccgttac
tacgccgacaagcaggatagtattgaagatctgattacctcgatggaggaatcttatgga
gggaccggcggccagaatagccgtgaatataatctcgatgaagccgagctggctgatgcc
gcaccgattcgtaagctgctgaacatgattctgctgctggccattaaggatcaggccagc
gacattcactttgaaccgtttgaagacgagttcaaggtgcgtgtgaaagcggacgggatg
ctctatgaaatggtgccaccccctcgtcacctggcgaatgccattgtcagtcgtatcaag
attatgagtgatctggatattgctgaacgtcggctcccccaggacggtcgaattgagctg
aacgtgggtgggaacagtgtggacttgcgagtcagtattctgcccacactgtttggcgaa
gcggtcgttatgcgagtgctggaccgaacggtcgtgcagctcgatctgaataaaatcggg
atggacgccaatacgctgacacgctttcgcagcatgatcaagcggccgaacggcattgtg
ctggtgacgggaccgacaggttctggcaagacgaccacgctgtattcggctttaaatgaa
ctcaatgacgttgaaaccaagatcattacgacagaagacccgattgaatacgaaatcgag
ggcctgctgcaggtgcctgtgaaccatgatatcggggtgactttcgcgacggtgctgcga
gcgattttgcgtcacgatcctgacacgattctggtgggtgagattcgcgactacgaaacg
gctgaagtttcagttcaatccgcacttacggggcacctggtcttcagtacgctgcatacc
aacgatgccccatcggcgattactcgattgcgggatatgggtgtcccacccttcctgatt
acggcttgtgttgaagcagtactggctcagcggctggtgcgacgaatctgtacagaatgc
cgcacgaagtttgatcccagtgatgaattgctgatggagttgcaactgccgattcagcag
gctcgtaaatataatttctactacggcaaaggttgccagcgttgtaacaactctggctat
aaaggccgttgcggaatttacgaactgctggatgtcacagacgatattcgcgatctgatt
gccgcgagtgcttctgtggacgacatccgtaattttgcccgctcgcaggggatgaccact
ttgcgagaggccggattgaagctgatttttgacggtgtgaccacgattgatgaaattgtg
agggaaacaattacggaagatggcgaaggctaa
DBGET
integrated database retrieval system
