Planctopirus limnophila: Plim_0422
Help
Entry
Plim_0422 CDS
T01225
Name
(GenBank) phosphoesterase RecJ domain protein
KO
K06881
bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:
3.1.3.7
3.1.13.3
]
Organism
plm
Planctopirus limnophila
Pathway
plm00920
Sulfur metabolism
plm01100
Metabolic pathways
plm01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
plm00001
]
09100 Metabolism
09102 Energy metabolism
00920 Sulfur metabolism
Plim_0422
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plm03400
]
Plim_0422
Enzymes [BR:
plm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.7 3'(2'),5'-bisphosphate nucleotidase
Plim_0422
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.3 oligonucleotidase
Plim_0422
DNA repair and recombination proteins [BR:
plm03400
]
Prokaryotic type
Other factors with a suspected DNA repair function
Others
Plim_0422
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
ADG66272
UniProt:
D5SPP2
LinkDB
All DBs
Position
525288..526313
Genome browser
AA seq
341 aa
AA seq
DB search
MNTIDWKPIVPLIESHQRILVSSHVRPDADAIGSALGLACLLKHLGKTVRIVNPSAPPAN
LFWIDPEQMVETFGGSVNGASLAETDLHIIVDTSAWQQLGELGKWMRTTTIPRIVIDHHV
SSDDLGAMEFKDTRSEATGSLIFRLCEFMNVPLTQVAATALYAAIATDTGWFRFPATNAQ
TMQIAGALMERGADPTDIYRHLYEQSTLARLHLCGRVLGRAQLDADGLLASTVVKWSDFV
ELGAVPADTEDLVNECLRIAGTRAAYIGVEQMNSQIKFSFRSRGGLNVASIAEKFGGGGH
KQAAGATLPGPLDVAHARVHAAMLEGLKALPDPASSSIPAS
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgaacacgattgattggaaaccgattgtcccgctgattgaatctcatcaacgcattctg
gtatcgagccatgttcgaccagacgcggatgccattggatcggctttaggcttagcctgt
ctgctcaaacatctcggcaagacagtccgcattgtgaatccctcggcaccgccggccaat
ctgttctggattgaccccgagcagatggtcgaaacgtttggcggctctgtgaatggtgcc
agtctggctgagaccgatttgcacatcattgtcgataccagcgcctggcaacaattgggc
gaactcggcaaatggatgcgcacgaccaccattccgaggatcgtcatcgatcatcacgtc
agcagtgatgatctcggagccatggaattcaaagacactcgatcggaagcgacaggttct
ttgattttccgtctttgcgaattcatgaatgttcctcttacccaagtcgcagcgacggcc
ctttatgcggccattgccactgatacgggctggttccgctttcctgccaccaatgcgcaa
acgatgcagatcgcgggtgcactcatggagcgtggggccgaccccacagatatctaccgt
catctctacgagcaatcgacccttgccaggctccacctttgtggccgagttttagggcgt
gctcaactcgatgccgatggcctgctggcatcgacagttgtgaaatggagcgactttgtc
gaactcggagcagtgcctgcagacaccgaagatctcgtgaacgaatgtctgcgcattgct
ggcaccagagcggcctacatcggcgttgaacagatgaatagccagatcaaattcagcttt
cgcagtcgtggtggactgaacgtagcttccattgccgaaaagttcgggggtggtggtcat
aaacaggctgccggtgcaactcttcccggccccctcgatgtggcacacgcgcgagttcac
gcagccatgctcgaaggcttgaaagcccttcccgatcctgccagcagttcaattcctgcc
agttaa
DBGET
integrated database retrieval system
