Planctopirus limnophila: Plim_0425
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Entry
Plim_0425 CDS
T01225
Name
(GenBank) type II secretion system protein
KO
K02653
type IV pilus assembly protein PilC
Organism
plm
Planctopirus limnophila
Brite
KEGG Orthology (KO) [BR:
plm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
plm02044
]
Plim_0425
02035 Bacterial motility proteins [BR:
plm02035
]
Plim_0425
Secretion system [BR:
plm02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
Plim_0425
Bacterial motility proteins [BR:
plm02035
]
Pilus system
Pilus assembly proteins
Plim_0425
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSF
Motif
Other DBs
NCBI-ProteinID:
ADG66275
UniProt:
D5SPP5
LinkDB
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Position
complement(529103..530323)
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AA seq
406 aa
AA seq
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MDLVPVMSTFTYTARDIQGTTHSGSVEAETLAMAVRQLKTDGLYPVQLVESAVSLQLKPW
LTRKPRQADIVSMTSQLAVVVDAGVALSVALEGLASQAVSPALKQMLTTIEERVKSGDDF
STALSEFPRSFDARYVNLVKAGEATGHLGPILSRLAEQLQQESETRQRVQGAMMYPAAML
LMCVGACIFLLTYVFPKIAPMFAGRGIELPAATRILLTVSNSLTGYWWAWILGVVALVAA
NAYLLSKEWGQRLRDRLMLQLPILGPLVRKTILARIARTLSATVSAGVPVLPALELAAKV
AGNRIFQDAMEDVALHVTSGQSIAQIMATNPVFPKSVVQMIAAGEQTGQLGTVLGKLSDH
YDREVAVSIKSATSLIEPIMVAVMGLVIGTIALGMLLPIFKLSTHH
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggacctggtgcccgtaatgagcacgtttacctacacagcacgtgatattcagggcacg
acccattcgggcagcgtggaagctgaaacgctggcgatggcagttcgtcagctcaaaacg
gatggattgtatcctgtccaactggtggaatcggcagtctctcttcaattgaagccctgg
ttgacacgtaaacccaggcaggcagatattgtttcgatgacgagccaactggccgttgtc
gtcgatgccggcgtggcactttctgtggctctggaaggactggcctcacaagcggtttcg
cccgcactaaaacagatgctgacgaccatcgaagaacgtgtgaaatcaggagacgacttt
tcgacggctttaagtgagttcccgcgaagctttgatgcacggtacgtcaatcttgtcaaa
gccggtgaagcgacaggtcatctggggccaattctcagtcggctggcggaacagcttcag
caagaatccgaaacgaggcaaagagtacagggggcgatgatgtaccctgccgccatgctg
ctgatgtgtgtcggagcctgtatttttctgctgacgtatgtcttcccaaaaattgctccg
atgttcgctggccgggggattgaattgccagcagcgacacgcattctgctgacagtttcg
aattcgctgacaggttactggtgggcgtggatccttggtgtcgtggccctggtggcggcg
aatgcttatttgctctcaaaggaatggggtcaacgtcttcgcgaccgcctgatgctgcaa
ttgcctattctggggccactggttcgtaaaaccattctcgctcggattgcaagaacactt
tcggcaacagtctcggccggtgtgcctgtactgcctgcactcgaacttgctgccaaagtg
gctggaaaccgcatctttcaggatgcgatggaagatgtggccttgcatgtgacctctggt
cagtcgatcgcgcagatcatggcgacgaaccctgtctttcccaaatcggtcgtgcagatg
attgctgcgggagagcagacggggcaattgggaactgtgctgggcaagttgagtgatcat
tatgatcgcgaggtggccgtctcgattaaatcggccaccagcctcatcgagcccattatg
gtcgctgtaatgggcctggtaattggcacaattgccctggggatgctgctgccgatcttt
aagctgagcacgcatcattag
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