Planctopirus limnophila: Plim_0431
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Entry
Plim_0431 CDS
T01225
Name
(GenBank) Tetratricopeptide TPR_4
Organism
plm
Planctopirus limnophila
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_7
TPR_17
TPR_2
TPR_1
TPR_8
TPR_11
TPR_16
TPR_14
TPR_12
TPR_4
TPR_15
TPR_9
BTAD
TPR_6
TPR_10
ANAPC3
Coatomer_E
DUF6584
TPR_21
Motif
Other DBs
NCBI-ProteinID:
ADG66281
UniProt:
D5SPQ1
LinkDB
All DBs
Position
complement(536619..538466)
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AA seq
615 aa
AA seq
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MPVRLVNIRRFACAASLAWAIGSTVGCAPMSGWVMNSSGAAYYQRGEFEMARNEFARAVY
DDPLNPDYRFNLAVAQSRLGQVAEAEQILQHNLTIDPSHEPTYAALSRLMIDTGRSSEAV
GVMQTWVGSQPYNPDAYVGLASAQQKTGDLSAAQQTLQQALRVQPNEPKVLAQLGEIHQA
QGNVAMASQMYQQSLAANVHQPDVQAKLMATANQAHPGSMPATQLAQSMPKVPSVLHPIA
SGQKTPVSPTAAPTSIARRAPQNAHQAVQQQAQNQPAINQVAQHRPALQPIPARQPTPIA
ASPAMNAPAQFAMASQVSAMPQGNMVQWQAPAQAPSPVPGYRYVILPQPVAFLVPQGQVA
QQQVPQQYQVSYQPVMSQPAGVQPAMLPQGVVTQAQPVQTQPMQVVYQWPQNYGVPANGM
TAMVIPQASQPQTTYGAQAMMAPATQNFATQNHATTFTPPLYQQQPAAVRSPMVSSVPNP
GTSETIFPVSYHPLPMTNATSRKEVSPVETSAPAQVPAFTPPPQEPTVVSASHTTTAPAT
TSNRSGTPIQVLSTPTETLVLPGVIQQPSSPATNLETSATNMHVPPAPTRTGQPVVVAPS
TSLVSQTTTELPPGF
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgcctgttcgtcttgtcaacattcgtcgttttgcctgtgctgccagtctggcctgggca
attggatctactgttggttgtgcccccatgagtggctgggtgatgaacagttctggtgcg
gcgtactaccagcgcggtgagtttgaaatggctcgcaatgagtttgccagagccgtctat
gacgacccgctcaatcctgactatcgtttcaatctggctgtggcccaatcgcgacttgga
caagtggctgaggctgaacagattctgcagcacaatttaaccattgatccttcgcacgaa
ccgacttacgcagcgctctcacgtctgatgatcgatacgggacgctcttccgaagctgtc
ggagtgatgcagacctgggtgggttcacagccttacaatcctgatgcttatgtcggcctg
gcctcggctcaacagaagacaggtgatctgagtgcagctcagcagacattgcagcaggca
ctgcgagtccagcccaacgagcccaaagttctagcgcaactgggcgagatccatcaggct
caggggaatgtggctatggccagccagatgtatcaacaatcattggcggcgaatgtgcat
cagccggatgtgcaggcgaaactcatggcgacggccaaccaggctcatccgggaagtatg
cctgctacacagcttgctcagtcgatgcccaaagtcccttcagttctgcacccaatcgcg
tccggccagaaaacccctgtctctccgactgctgcaccaacttcaatcgcccggcgggcc
ccgcaaaacgcccatcaggctgtccagcagcaggcccagaaccaaccggctatcaatcag
gtggctcagcatcgaccagcattgcagcccattccggctcgccagccgacaccgattgca
gcttcacctgcgatgaatgcacctgctcaattcgccatggccagccaggtttcggcgatg
ccacaagggaatatggtgcagtggcaggcacctgcacaggctccatcaccggtcccagga
tatcggtatgtgattcttccacagccagtcgccttcttggtgccgcagggacaggttgct
cagcaacaggttccccagcaataccaggtttcttaccagccggtgatgtcacagccagcg
ggagttcagcctgccatgcttccacagggcgttgtgactcaggcacagcccgttcagact
caaccgatgcaggtggtttatcagtggcctcaaaactatggagtaccagcgaatggcatg
acggccatggtgattccacaagcttcgcagccacaaactacatacggcgcccaggccatg
atggcaccggcgacacagaatttcgcaacacagaaccatgcgacgacatttacgccacca
ttgtaccagcagcaaccagcggctgttcgttcgcccatggtcagttcggtgccaaatccc
ggaacatcggaaacgatcttccctgtcagctatcatccattgccgatgacgaatgccacc
agtcgtaaagaagtttcgcctgtagaaacgtcagcaccagctcaggttccagcctttaca
cctcccccgcaggaaccaaccgtggtgagtgcatcgcacacgacgactgctcccgcgaca
acatccaaccgcagtggcacgccaattcaggtactttcgacacccacggaaacgctggtg
ttgccgggagtgatccaacagccctcgtcaccggccacaaatctcgaaacctcagcaaca
aacatgcatgttccaccggctcccaccagaaccggccagccagtggttgtggcaccgtca
acatcgctggtctctcagaccacaacggaactgccgccaggcttctaa
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