Planctopirus limnophila: Plim_0462
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Entry
Plim_0462 CDS
T01225
Name
(GenBank) polyketide-type polyunsaturated fatty acid synthase PfaA
Organism
plm
Planctopirus limnophila
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ketoacyl-synt
Acyl_transf_1
Ketoacyl-synt_C
KR
PP-binding
PS-DH
adh_short
KAsynt_C_assoc
PKS_DH_N
adh_short_C2
Thiolase_N
DNA_processg_A
Motif
Other DBs
NCBI-ProteinID:
ADG66312
UniProt:
D5SQ60
LinkDB
All DBs
Position
complement(580597..587841)
Genome browser
AA seq
2414 aa
AA seq
DB search
MTGMAPSTMSQLATTPQQHGSAPEPIAVIGLSCLFPEAASAEEFWSNIRRGVDCIREIPE
THWNVDDYFHADPKSPDRTYARRGGFLKAVDFDPLEFGISPNNLEAIDTSQLLGLVAAKR
ALENAGYGQERVFNRSRVSCILGVTGTLEMVIPLGARLGHPHWKRALEEAGVAPSVAQDV
IERISAAYVPWQENSFPGLLGNVVAGRIANKLDLWGTNCVVDAACASSLSALHLALLELQ
AGRSDMVLTGGVDTFNDIFMYMCFSKTPALSPTGDARPFSQNSDGTMLGEGVGLMVLKRL
ADAKRDGDRVLGVIRSVGTSSDGKGTAVYAPKAEGQIRCLEDAYQQAGISPHEIDLVEAH
GTGTKVGDATEIKGLTTIFEAAARTVAGEAKSAWCAVGSVKSQVGHTKAAAGIASLIKVL
LALHHEVLPPTIKVDQPADALRSNSGDRQSPFYVNIQSRPWLPGLNRKRRAGVSAFGFGG
SNFHCVMEEAPAECRPPRQPGWDGQIQLLTFSGPDDDQLIRTIHEFLAQARRSPKTVRQL
ASQLRSQFRAQDLCRLAMVADLSSTDWPTPATRAIEQIGRTRQSPLEAPVQWTLPEGVAY
SRGFASGSIGLLFPGQGSQYPGMLRDLACLFPEMRDVLAAANHAFADAPRTGNRAFSWTL
SDAIYPVNVWNDEARALATTQLKATDVAQPALGAVSLGGWRVLQRFGIRPTAVAGHSYGE
LTALCAAGRFSPEELYRLSMLRGQLMAEGELQPGGMLAIHASSEVVEQALRELNLELVIA
NHNSPSQVVISGRLDQIARAGELLGQRNLRGKQLAVAAAFHSPLVAQAAHKFRPALEQIP
FHGGSIPVYANSSAKVYPQEADAARELLASQLARPVHFLDEIRAMYQSGVRTFIEVGPGH
VLTGLVSSILSGQPHQALALDSSQGRRRGEWDLAWLLGQLAVSGHDLQLAHWDAPTLWSN
HHLPEPREGTIPICGANYTKPKPPLPVKTKLAEPVQIPATSSELPRANLTNAIGSMPQSS
SDVAQQHASLTPPKSSMSPELSSHTTASSSTGASAKSSEFSLNSMEDRFVTNSITNTAQI
NQTQPLTHPVQIKDSSPVASYLETLQAIQQQTALAHQTFLAQQQQALQLLTQLIQHVPAA
SPNGSMTSPATQALAAPLPPAMPPIVTPAVPATTILAIPPVAVLPPAPPMITPAQPVVSA
VVPAAVPVTVPAPVPVMAPPAGKTNSELAASLLEVVSEKTGYPKEMLQLRMSLDHDLGID
SIKRVEILSAMQERFPNLPAVSPEQLGSLQTLADVVAAYPQSTTGTAPAVAKIPQELTAP
VPTSSRSQTSSVSESSGLAASLLEVVAEKTGYPKEMLQLRMSLDHDLGIDSIKRVEILSA
MQERFPNLPVVSPEQLGSLQTLADVVAAYPGEPVPSAGIAASSGVIQSSASPSVSMPAAS
HGTNGSNGHSGGSDLANALLQVVAEKTGYPKEMLQLRMSLDHDLGIDSIKRVEILSAMQE
RFPNLPVVSPEQLGSLQTLADVVAAYPETTAAGIPVSTYELKKNTSSDALGSFGLIVEST
HKENELPPTAIAGSTQAMPREVRFPEPHTLQRGLLKTVALAPASERRTKDVFRHEVWITD
DGLGESGLSRALASALINEGITSRIVPQTATIQGASVVSVPDVLSGLILLPSTAAQDPLT
NLWQNLEWLQQVSSALRKDVVAGERRLLGGVVRLNGHFGVLDSNAPRHIVAPESGGLTGL
IKTARHEWPEVTARVFDIGQLSHTEAVPQLVEELLATGPLETGIAQFPGGSPVEVQVEWN
TLDVQGATAQANPVLSTGDLVVVSGGARGVTMEAALEFGKALGTTMVLLGRTPPPELSAT
TSENDRPLTEIEFRQQIMSENPVGWTPRMVADEARQRLAQQELRTNLDRFAKAGVRAVYQ
RVDVSNPSSVRHALAEIVATMGPIRGLIHGAGVIADARIERKTREQFDDVMRVKVQGLKH
LLAAIDPSQLRMLGLFSSFTGRYGRTGQADYAIANEILNKQARGWAAQHPECHVTSWNWG
PWDGGMVNDQLRAIFSKEQVGLIPLREGASIFASEYCQSSERPVEIVVLAPVQPTAAATL
VESQTPIEKTKPVVASRQGFDRLLSVNDHPFLDDHVIGGKAVLPLAMMLEWMAHGAAHLS
PGMALSGFENVKVMKGVRLSSHELAHLKVQLEPLAEADSPRHTSGWVQPWQARLTSEAAG
RTLLHATADVIMTGQTIDQTPVTTTNELRGDSFDRSILPADLYQEWLFHGPLMQGIEQVL
TCNERQLSVISRVAEAPRLWMHKPHRHSWLIDPLVLDVIFQMAIVWAWQQRGMPSLPTGI
RRIEILQRKWPAEGVIITCRIQKTTAHVVSMDVEILNRQGQTLARLEGVDSLMDASLKPA
FAARRLSPGQLLNR
NT seq
7245 nt
NT seq
+upstream
nt +downstream
nt
atgaccggcatggctccctcgacaatgtctcaacttgctacgacaccacagcaacatgga
tctgctccagaaccgattgcggtcatcggtctgtcgtgtctgtttccggaagcggccagt
gccgaggaattctggtcaaatatccggcgtggtgtcgactgcattcgtgagattcccgag
acacactggaacgtcgacgactatttccacgctgacccgaaatctcctgatagaacctat
gcccgtaggggtgggtttttgaaagctgttgatttcgacccgctcgaatttggcatctca
ccgaataatcttgaagcgattgatacctcccagctcttggggttggtggccgccaaaaga
gcgttggaaaacgcaggttacgggcaggaacgagtcttcaacagatcgcgggtttcgtgc
attctcggagtcaccggtactctcgaaatggtcattccactgggtgctcgactggggcat
ccgcactggaaacgagctctcgaagaagcgggtgtggccccctcagtggcacaggatgtc
atcgagcgcatctcggcagcgtatgtcccctggcaggaaaactctttccctgggctacta
ggaaacgtggttgccggtcgaattgccaataagctcgacttgtggggcacgaactgtgtg
gtcgatgccgcctgcgccagttcattaagcgcgttacacctggctctgctcgaactgcag
gcgggtcggagcgatatggtgctcaccggaggtgtcgataccttcaatgatatcttcatg
tatatgtgcttcagcaaaacgccggcactgtctccgacaggagatgcccggccattcagc
cagaactcagatggcacaatgctgggtgaaggtgtcgggctgatggttctcaagcgactc
gccgatgcaaaacgggatggcgatcgcgttctgggtgtcattcgcagtgtggggacttcc
agtgatggcaaagggactgcggtttatgcgcccaaagccgaaggtcagattcgctgcctg
gaagatgcctatcagcaggcggggatttctccccacgaaatcgatctggtggaagctcac
gggacgggaactaaagttggcgatgccaccgaaatcaaaggtctgacgacgatctttgag
gccgctgcccgaacagttgccggcgaagcaaaaagtgcctggtgtgctgtcggctccgtc
aagtcgcaggttggtcacaccaaagcggctgcaggcattgccagtctgatcaaagtgctc
ctcgcacttcaccacgaggtcctgcccccgacaattaaagtcgatcaaccggcggatgct
ctccgctccaattccggcgatcgtcaaagcccgttctatgtcaacattcagagccgccct
tggctgccgggcctgaatcgcaagcggcgggcaggagtcagtgcgttcggctttggagga
agtaactttcactgtgtgatggaagaagcaccggctgaatgccgcccgccacgccaaccg
gggtgggatggtcagattcaactgcttacgttcagtggccctgatgacgatcagctcatt
cgaacgatccatgagtttctcgcgcaggctcgtcgttcaccaaaaacagttcgccagcta
gcatcacaattgcggagccagtttcgtgctcaggatctctgccgactagccatggtggct
gatctttcctcgaccgactggccaacaccggcaacacgggcgatcgagcagatcggccgc
acgcggcagtctcctctcgaagcacctgtgcaatggacacttcccgaaggagtcgcctat
tcgcgaggattcgcctctggatcgatcggacttttattccccggacagggatcacagtat
ccgggaatgctccgcgatctggcttgtctctttcccgaaatgcgggatgtgctggctgct
gccaatcatgcctttgcggatgcacctcgaacgggaaatcgggccttttcctggacgtta
tcggacgcaatttaccctgttaacgtctggaatgacgaagcgcgtgctttggccactacc
cagctgaaagccacggatgtcgcacagcctgccttaggcgccgtcagcctgggaggatgg
agagttcttcaacggtttggcattcgaccaaccgctgtggctgggcatagctatggggaa
ttgaccgctctgtgtgcggcgggccgattttcgcctgaagagctttatcgactcagtatg
ctgcgcgggcaactcatggcggaaggagaacttcagccgggtggcatgctcgcaatccat
gcttcaagtgaagttgtcgagcaggcacttcgcgaattgaatctcgaactggtaattgcc
aaccataacagcccttcacaagtcgtgatctcgggtcggctggatcagattgcccgggct
ggtgaattgctgggccagcggaatctgcgaggcaaacagttggcggtggctgcggcattc
catagcccgctggtcgcacaggcggcccacaaattccgtccggcactcgaacagattccc
tttcatggcggatcgattcccgtttacgccaactcatcggccaaagtctatccacaggaa
gcagacgctgcccgcgaactgctggccagtcaactggccaggcctgtccattttttggat
gagattcgcgcgatgtatcagtcaggggtgcgcacgtttatcgaagtgggccccggccac
gtgttgacagggctggtctcttcgatcctgagtgggcaaccgcatcaggctctggctctt
gatagttcacaaggacgccgacgaggtgaatgggatctggcctggttactgggccaactg
gctgtgagtggtcacgatcttcaactcgcgcattgggatgcccccacactctggagtaat
caccatctccccgaaccacgggaaggcaccattccgatctgtggtgccaactacaccaag
cccaagccacctctgcctgtcaaaacgaagttggctgagccggttcaaatcccggcaacg
agctctgaactgccgagagccaatttgaccaacgctattggttcgatgcctcaaagctct
tctgatgttgctcaacagcatgcttcattgacaccaccaaagtcatcgatgtcacctgag
ttaagttcacacactacggcatcttcatcgacaggcgcatcagctaagtcttccgaattt
tcactgaattctatggaagatcgtttcgttaccaacagcatcacgaacaccgcacagatc
aaccaaacacaaccgctcactcatcccgttcagatcaaggattcttcccccgtggcatcc
tatcttgagacactgcaggccattcagcagcagaccgctctggcacatcagacatttctc
gcgcagcagcagcaggctttacagttgttgacacaactcattcagcatgtgccagccgcc
agccccaatggttcaatgaccagccctgcgacccaggcactggcagcacctctgccaccg
gcaatgccacccatagtgacacctgcggtgcccgccacaacgatcttggctataccgcca
gtcgccgtcttgccaccggccccacccatgatcacacccgctcaacctgtggtctcagca
gtggtaccagcagcagttccagtcacagtaccagctcctgtgccagttatggcacctcca
gccggaaagacgaactccgaactggcagcgtcacttttggaagtggtctctgaaaagacc
ggctaccccaaggagatgctgcaactgagaatgagtcttgatcatgatctgggaatcgat
tcgatcaagcgcgtcgaaattctcagtgccatgcaggaacgtttcccgaacctgcccgcc
gtgtctccagaacagctcggctcgcttcagactcttgccgatgtcgtcgcagcctatccg
caatcgacaacaggtactgcaccagcagttgcgaagattccccaggaactgaccgcacca
gtaccgacttccagccgatcgcagacgagttctgtcagcgaatccagcggtctggctgcc
tcactattagaagtggtcgcagaaaagacggggtaccccaaggaaatgctgcaactgcgg
atgagtcttgatcatgatctggggatcgattcgatcaagcgggtcgaaattctcagtgcc
atgcaggaacgtttcccgaacctccctgttgtgtctccagaacagcttggctcgcttcag
actctcgccgatgtcgtcgctgcctacccgggcgaaccagtgccgtccgcgggcatcgcg
gcttcctcgggagtgattcagagttcggcctctccttccgtgagcatgccagcagcttcc
catggaaccaatggttcaaacggacattctggcggatctgatctcgccaatgccttgctg
caggtcgtcgccgaaaaaacgggttaccccaaggaaatgctacagctgcggatgagtctt
gatcacgacctggggatcgattcgatcaagcgtgtcgagattctcagtgccatgcaggaa
cgattcccgaacctgcccgtcgtttctccagaacaactgggctcgctccagacactcgcc
gatgtcgttgcggcttatccggagaccactgctgcaggcattcccgttagcacgtatgag
ttaaaaaaaaacacttcatctgatgcactaggctcattcggactcattgttgaatccact
cacaaagagaatgagcttcccccgactgccattgctggcagcacacaggccatgccccgt
gaggttcgcttcccggaaccacacacactccagcgtggccttttgaaaacagtggctctc
gcacctgccagcgaacgccgcactaaggatgtattccggcacgaagtctggatcactgat
gatggcctcggagagagcggtctttcccgcgcactcgccagtgctctgatcaacgagggc
attacctctcgaattgtgcctcagacagccaccatacaaggtgcgtcggtggttagtgtt
cccgatgttctgagcggcttgatccttctcccaagtacagcggcccaggaccctttgaca
aacctgtggcagaacctcgaatggctgcagcaggtttcgtcggcacttcgcaaagatgtt
gtggccggtgaaagacgattgttaggcggcgttgtccgtctcaatggccactttggagtt
ttggactccaacgctcctcgccacatcgtcgctccagaatcgggcggattgaccgggctc
atcaagaccgctcggcacgaatggcccgaagtcactgcgagagtgttcgacataggacaa
ctttcccacacagaggctgtaccgcagcttgtggaagaacttttggccacaggccccctc
gagacggggatcgcgcagtttccgggaggatctcccgtagaagttcaggtggaatggaac
acgctcgatgtgcagggagcaactgcccaagcgaaccccgttctgtctactggcgatctc
gtcgttgtctcaggtggtgcccgcggcgtgacgatggaagccgcccttgaattcggcaaa
gccctggggacaaccatggtgctattggggcgaactccgcctcctgaactttctgcgacg
accagcgagaatgaccgaccactgacggaaatcgaattccgtcagcagatcatgagcgaa
aatcccgtcggctggacacctcgaatggtagcggatgaagcccgtcaacgattggcgcag
caggaactccgtaccaatcttgatcgttttgcgaaggctggtgtgcgagccgtttatcaa
cgggtggatgtttcgaatccctccagtgtccgccacgcgttggcagagattgtggccact
atgggccccatccggggtttgattcacggggcgggtgtgattgcggatgcgcggattgag
cgtaagacccgggagcaatttgacgatgtcatgcgtgtgaaggttcaggggctgaagcat
ctccttgccgctattgatccatctcaattgcgcatgctgggcctattctcttcgttcacc
ggtcgatacggccgaacgggacaggccgactacgcgattgccaatgaaattctcaataag
caggcgcggggatgggcagcgcagcatcccgagtgtcatgtgacctcgtggaactggggg
ccatgggatggcgggatggtgaatgatcagttgcgagccattttttccaaagaacaggtg
ggattgattcccctgcgggaaggtgcttcgatttttgccagcgagtattgccagtcgagc
gagcggccggtcgaaatcgtcgtcctggctcctgtccaaccgacggctgcggcaacactc
gttgagtcacaaacgcccattgaaaagactaagccagtcgtggccagtcgacaggggttt
gatcgattactgtcagtcaatgaccatccttttctggatgatcatgtgattggaggaaaa
gcggtccttccgctggcgatgatgctcgaatggatggctcatggggcagcacatctttcc
ccggggatggcactgagtggttttgagaacgtcaaagtgatgaagggtgtccgcctcagt
tctcatgaactcgctcacctcaaggttcaactggagcctttagccgaagctgacagcccc
cgccacaccagtggatgggttcaaccatggcaagcccggttgaccagcgaagcggctgga
cgaacgctgctgcacgccacagcagacgtcatcatgacggggcagaccatcgatcaaact
cccgtaaccaccaccaacgaattgcgaggagactcgtttgatcgttcaatcctgcccgct
gatctgtatcaggaatggttgtttcatggccctctcatgcagggcatcgagcaggttctg
acctgcaatgaacgacaactcagcgtgatctcgcgcgtggcagaggcccctcggttgtgg
atgcataaacctcatcgtcacagttggctgattgatccccttgtcttggatgtgatcttt
cagatggcgattgtctgggcttggcaacagcgtggcatgccgtcgttaccgactggaatt
cgccgcattgaaattctccaaagaaagtggcctgccgaaggtgtgatcatcacgtgccgc
atccagaagacgacagcccatgtcgtcagcatggatgtggaaatcctgaatcgacaaggc
cagacactggcacgactggaaggagtggattctctgatggatgcctctctcaagccggca
tttgcagcccgcaggctgagccctgggcaactcctcaatcgatag
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integrated database retrieval system
