Planctopirus limnophila: Plim_0774
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Entry
Plim_0774 CDS
T01225
Name
(GenBank) helix-turn-helix-domain containing protein AraC type
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
plm
Planctopirus limnophila
Brite
KEGG Orthology (KO) [BR:
plm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
plm03000
]
Plim_0774
Transcription factors [BR:
plm03000
]
Prokaryotic type
Helix-turn-helix
LacI family
Plim_0774
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
HTH_18
HTH_AraC
Peripla_BP_4
Peripla_BP_1
PBP1_XylR
TetR_N
Motif
Other DBs
NCBI-ProteinID:
ADG66619
UniProt:
D5SRT5
LinkDB
All DBs
Position
complement(1003812..1004966)
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AA seq
384 aa
AA seq
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MKPRKRVALVIETSLAYGRAVLRGISKYLVANQPWSMYLDLHELMAQPPRWLENAEIDGV
ISRSTTPELAASLLRRRIPTIDMTDFRLHDGLPHVYTDHRAVGKLAAEHLQERGFRQFAY
CGFSDHAWSSERREGFANAITGQGDLHIYESRWQTSSSQTWAQQQQEIRGWLEALPKPIG
IMAANDMRGHHVLDACRQLELAVPESVAVIGVDNDEVLCELCDPPLSSVVPNPERIGYEA
AAMLDRMMAGDSWPTETLYIPPMGIVTRQSTDVLATDDPIVASSLKIIREGACHQLTVDE
ILARVNTSRSVLERRFRKHLGRSPQEEIRQVQLKRVKQLLEETELPLSRIAELSGFQHAE
YLSVVFKRELGMTPGSYRKSANLR
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
gtgaagccccgaaagcgagttgccctggtcatcgaaacgtctctcgcttatgggcgcgcc
gttttgagagggatttccaaatatctcgtggcgaaccagccatggtcgatgtatctcgat
ctgcatgaattgatggcacaacctccccgctggctcgaaaacgccgagatcgacggtgtc
atcagtcgatccaccacaccagaactcgctgcttcacttctcaggcggcgaattcccacc
atcgatatgacggatttccggctgcacgatggcttgccgcatgtctataccgaccatcga
gcggtcgggaaactggctgcggaacatctgcaggagcgaggtttccgccagtttgcgtac
tgcggcttttcggatcatgcctggtcatccgagcgtcgcgaaggttttgccaacgccatc
actggccagggcgatcttcatatatatgaatcacgctggcagacttcatccagccagaca
tgggcgcagcagcagcaagagattcgtggctggctggaggcgcttcccaagcctattgga
atcatggctgccaacgatatgcgcgggcatcatgtgcttgatgcctgccggcaactggaa
ctcgccgtgccggaatcggtcgcagtgattggtgtcgataatgacgaagttctttgcgag
ttgtgcgatcctccgctttccagtgtcgtgcctaacccggaacgcattggatacgaggcc
gctgccatgctggatcgcatgatggcaggagattcctggccgacggagacgctttacatt
ccccccatgggaatcgtgacccgacaatcgaccgatgtgctggcgacggacgatccgatc
gttgccagctcattaaaaatcattcgtgaaggtgcctgccaccagctcactgtcgatgaa
attctcgctcgcgtgaacacttcacgcagtgttctcgaacgtcgatttcgcaaacatctg
gggcgttcaccgcaagaagaaatccgtcaggttcaactgaagcgagtgaaacaacttctc
gaagaaaccgaattaccattgagccgcattgccgaattgagcggcttccagcatgccgaa
tacctgagtgtggtgttcaaacgggaacttggtatgacgccgggaagttatcgcaaaagt
gccaatctgcgataa
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