Planctopirus limnophila: Plim_0794
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Entry
Plim_0794 CDS
T01225
Name
(GenBank) type II and III secretion system protein
KO
K02280
pilus assembly protein CpaC
Organism
plm
Planctopirus limnophila
Pathway
plm02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
plm00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Plim_0794
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
plm02044
]
Plim_0794
02035 Bacterial motility proteins [BR:
plm02035
]
Plim_0794
Secretion system [BR:
plm02044
]
Type II secretion system
Tight adherence (Tad) export apparatus
Plim_0794
Bacterial motility proteins [BR:
plm02035
]
Pilus system
Pilus assembly proteins
Plim_0794
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Secretin
T2SS-T3SS_pil_N
BON
Motif
Other DBs
NCBI-ProteinID:
ADG66639
UniProt:
D5SRV5
LinkDB
All DBs
Position
complement(1030481..1032349)
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AA seq
622 aa
AA seq
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MQVRIHTHRWRAALVWGLCLCQSFLSYPGLTSSSGMAFAQNGNAPVAGEVVQITASRTKL
EIAERFARVVQFPRKILRVDGFDPAVLSVTALAHDQLRVQGITEGITTMVITDENGAITT
IDVMVAGDARLLQAVLSREYPNTSVTVTKLKDNVLLRGWVVEPQQITEIVDIAKLYYPNV
LNQMKMGGPQQVQLRCKVMEVQRSKLRSLGLNFTYLGRNVAFSSTPGAISPLDAFTVPIG
GPPGVGLAQSGFRNATMSLGIVGDDFAFGGLLEALREEGLLKIQAEPTIVTRSGEPAKIV
SGGEFPIPVPQGLGTIAIEWREFGVRLESVPMILSPNRLKQTIIAEVSERDLTNAVTLNS
TTVPGLTKRTVETQVEMNFGQTLAIGGLISSRKTAQTSKIPFLGELPYVGAAFRRVNYDE
AETELLVLITPEFVSAMDPAQVPDRLPGTASAVPTDRELFGQGIIEVPNYGDPCPNCGPR
GGSSTPSGVTGSGLSPIPADYPLPPAAPGLITPGGPLPPPPSPGISNPGAGQPSAPWPTE
RSTPAPQEFVPPISPPTGSPGDIPAPPGVTRNRNNSTGQSVAGSSKFSGPRTPATGRSDV
EQAGSRNPASGGLIQPVSGTRP
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtcagaattcacactcaccgctggcgtgcagcactggtttggggactttgcctc
tgccagtcctttctttcctatccagggctcacttcgtcctctggaatggccttcgcacag
aacggcaatgctcccgtcgccggagaagtcgttcagatcacggcatcgcgaacaaagctc
gaaattgccgagcgctttgcccgcgttgtccaattcccgcgcaaaattctgcgtgttgat
ggatttgatccggcagttctcagtgtgactgctctcgcccacgatcagcttcgagtgcaa
ggaatcaccgaaggaatcaccaccatggtgatcaccgacgaaaatggagcgatcaccacc
atcgatgtcatggtggcgggcgatgctcgattactgcaagcggtcctgagccgcgaatac
cccaatacctccgtcaccgtcaccaagctgaaagacaacgtccttttgcgtggctgggtc
gtcgaaccacaacaaatcaccgagatcgtagatatcgccaagctctattatcctaacgtc
ttgaatcagatgaagatgggtggcccgcaacaggttcaactccgctgtaaagtgatggaa
gttcaacgatccaagctgcgttcactgggcctcaatttcacttatctgggccgtaatgtc
gccttttcgagtaccccgggtgcgatctctcccctggatgcattcaccgtaccgattggc
gggccgccaggtgttggtctggctcagtcgggttttcgtaacgcgaccatgtcattagga
attgtgggtgacgactttgctttcggtggtcttctcgaagcacttcgcgaagaaggcttg
ctcaaaatccaggccgaaccaaccatcgtcacccgcagtggcgaaccagccaaaattgtc
agtggtggcgaattccccatcccggttcctcaaggtttaggaaccattgccatcgaatgg
cgagaattcggcgtcaggctcgaatcagtcccgatgattctttcacccaatcgtctgaaa
caaaccatcattgctgaagtgagcgaaagagacctcaccaacgctgtcacactcaacagc
accacagttcccggcttgaccaaacgaactgtcgaaactcaagtcgaaatgaacttcggt
caaacactggccatcggtggtctgatttcctcccgcaaaaccgcacaaacatcgaagatc
cccttcctgggcgaacttccctacgtgggggccgcattccgccgcgtgaattacgatgaa
gccgaaaccgaactcctcgtgctgatcactcccgagtttgtcagtgccatggatcctgct
caggttcccgacaggctgcccggtaccgcatcggcagttcctacagatcgcgaactcttc
ggccaagggatcatcgaagttcctaactatggcgatccctgccccaattgtgggcctcgt
ggtggatcgtccacaccatccggtgtgacaggttcaggcctctcgccaattcctgcagat
tatccattgccacctgccgcaccaggtctgattactcctggcgggccattgccaccacca
ccatctcccggaatcagcaatcccggtgctggccagccatcagcaccatggccaacagaa
cgatccacgcctgcaccacaagaatttgtacctccgatcagtccgccaactggctcacca
ggagatatcccggctcctcccggggtgactcgcaatcgcaacaactccacaggtcaatcc
gttgccggaagttcgaagttcagcgggcctcgcactccagcgacgggtcgatcggatgtc
gaacaagcgggaagccgaaatccagcctctggcggtttgattcaaccagtttcaggaact
cgtccatag
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