Planctopirus limnophila: Plim_1245
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Entry
Plim_1245 CDS
T01225
Name
(GenBank) DEAD/DEAH box helicase domain protein
Organism
plm
Planctopirus limnophila
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
ResIII
Helicase_C
DUF3516
nSTAND_NTPase5
DEXQc_Suv3
AAA_19
IstB_IS21
AAA_16
AAA_7
nSTAND3
PhoH
Motif
Other DBs
NCBI-ProteinID:
ADG67079
UniProt:
D5SUM7
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Position
1596492..1599029
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AA seq
845 aa
AA seq
DB search
MSDQELLRRDQVLEQYYDTLGYTPYPVQEEALFAWFTSETGVLISAPTGTGKTLIAEGAI
FEALKNQKTIYYTTPLIALTDQKFSEIQDAAERWGFSRDDVGLVTGNRKVNPDARVLVVV
AEILLNRLLHPDAFDFANVFAVVMDEFHSFSDPERGIVWEFSLSLLPPHVRLMLLSATIG
NANPFVTWLHRCHGRRLELVVGTERKVPLTFHWIGDQFVAEHLEFMAQGEGEARRTPALV
FCFDRELCWSTAEELKGRSVLQGDQQKQLAARLKDVDFKHGVGPKLKQLLHRGVGVHHAG
LLPKHRRLVEELFQEKLLSICVCTETLSAGINLPAKSVVMTCLLKGPPGKKKPIDASLAH
QIFGRAGRPQFDKEGFVYALPHEDDVRIARWKEKYDQIPEDTKDPLLIKAKKALKKKMPT
RNPAKQYWNDAQFEKLKTAPPRDLVSQGEFPIRLVAYLLKLSPEVDRIRVLVRKRLMDPG
RLNACERDFEQMLVALHHAGFVELDPPPPVASEPSKPETTETITEEIPEKLSWLSQHLQK
SIDEKRAQQGKKSATELKRQDETEKSVYRPLLAKPTAAMDRMFAFRSIHPLYGVFLADQF
EKADRIEWMLALESVLEFPKSLVRSVRIPPPRFLPPGRLALEVLDPEIIARGILPAGDLY
PEFDPSLPPEERKYAPTLPEKLLMLFQSDYPGISIPMTPVYVVADLEEFGFNFYKLIGGR
DLAKQEGLVFKHLLRMVLLLEEFADCPPPHRDPQAWRDELLELATRISWSCEAVDPQSTE
QALATNAARDVLQGETNDVPVVHEIELPPRPPGFGEADGEELPLVETTTEDNFGDGLEID
DEESA
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
ttgtctgatcaggaattactccgaagagaccaggttctcgaacagtattacgacacgctt
ggttacacaccttatccggttcaagaggaagcgctgtttgcctggtttacttctgaaact
ggtgtgctgatttcggctccgacggggacggggaaaacgctcattgctgagggggcgatc
tttgaagccctcaagaaccagaaaaccatctattatacgacacctctgattgcgctcacc
gaccagaagttttccgagattcaagatgctgcggaacgctggggtttctcgcgcgacgat
gtggggctggtgacaggcaaccgcaaggtcaatcctgatgcccgtgtactggtggtggtg
gcggagattctcctcaatcgattgctgcacccggatgctttcgactttgcgaatgtcttc
gccgtcgtgatggatgagtttcacagcttttctgatcctgagcgaggcattgtctgggag
ttctcgctctccttgctgccgccgcatgtccggctgatgctcctttctgcgaccatcggg
aatgccaatccatttgtgacgtggctgcatcgctgccatgggcgaagactggaacttgtg
gtggggacggagcgaaaggttcctctcacgtttcattggattggtgatcagttcgttgcc
gaacatctggagtttatggctcagggggaaggggaagctcgcaggacaccggcactcgtc
ttttgttttgatcgggaattgtgctggagcaccgcagaagagttgaaggggcgatctgtc
cttcaaggtgatcagcagaagcagctggccgcccgattgaaagatgtcgatttcaaacat
ggcgtggggccgaagctgaagcagctgttgcatcgcggtgtgggcgtccaccacgcgggg
ttattgcccaagcatcggcggctggtcgaggaactgtttcaagagaagctgctgtcgatt
tgtgtttgcaccgaaacgctttccgcaggcatcaacctgcccgcaaaatcggtcgtcatg
acctgtctcttgaaagggccacccggcaaaaagaaaccgatcgacgcgagcctggcgcat
cagatttttgggcgcgcggggcggcctcaatttgataaagagggatttgtttacgcctta
ccccacgaggatgatgtgcggattgcccgctggaaggagaagtacgaccagataccggag
gatacgaaagatcctctgctgattaaggcgaaaaaagcactcaaaaagaagatgcccacg
cggaatcctgccaaacagtattggaacgatgcacaattcgagaaattgaaaacggctcca
cccagagacctggtgagtcagggcgagtttcccattcggctggtggcctatctgctcaaa
ctctcacccgaagtggatcgaattcgtgtcctcgtgcggaaacgattgatggatcctggt
cggctcaatgcgtgcgaacgtgactttgagcagatgctggtggccttgcatcatgccggg
tttgtggaactcgatcctccaccaccggtcgccagcgaaccctcaaaacctgaaacgacg
gaaacaataactgaagagattcctgaaaagctgagctggctgtcgcagcatctgcagaaa
tcgattgatgagaagcgcgcccagcaggggaagaaatcggcgacagaactgaagcggcag
gatgaaaccgaaaagagcgtctatcgaccacttcttgcaaaaccgacggcggctatggat
cgcatgtttgcctttcgcagcattcatccgctctatggagtgtttctcgcggatcagttc
gaaaaggctgatcgcatcgaatggatgctggcactcgaaagtgtcctggagttccccaaa
tcgctggtgaggtctgtccgcattccgcctccccgatttttgccaccgggacgactggct
ctggaggtgcttgatccggagattatcgctcgagggattttgcctgccggagacttgtat
cccgagtttgatccctccttgccgccggaagagcgaaagtatgcacccacgttgcctgag
aagctgttgatgctgtttcaatccgattatcccggcatcagtatccccatgacaccagtc
tatgtggtggccgatctcgaagaatttggtttcaacttctacaagctgattggcggtcgc
gatctggccaaacaggaagggctcgtttttaagcatctgttgagaatggtgctgctatta
gaagaatttgcagattgccctcctccccatcgagatccgcaagcgtggagagatgagctt
ctggaactggcaaccaggatttcgtggagctgcgaggcggtggatccccaaagtacggag
caggctctggcgaccaatgctgcacgggatgtcctgcagggggaaaccaacgatgttccc
gtggtacatgaaattgaactgccacctcgtccacccggttttggtgaagccgatggcgaa
gagttgcctctggtcgaaacgacgactgaggacaattttggcgacggattagagatcgat
gacgaggaatcggcatga
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