Planctopirus limnophila: Plim_1349
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Entry
Plim_1349 CDS
T01225
Name
(GenBank) protein-export membrane protein SecD
KO
K12257
SecD/SecF fusion protein
Organism
plm
Planctopirus limnophila
Pathway
plm02024
Quorum sensing
plm03060
Protein export
plm03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
plm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
Plim_1349
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
Plim_1349
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Plim_1349
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
plm02044
]
Plim_1349
Secretion system [BR:
plm02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
Plim_1349
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
Sec_GG
SecD_1st
Motif
Other DBs
NCBI-ProteinID:
ADG67183
UniProt:
D5SVB3
LinkDB
All DBs
Position
1719918..1722911
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AA seq
997 aa
AA seq
DB search
MEGLFSGFTLLQASPAVADAPPGAPTANVWLLGIIALCVLTIPFLLGTLVAGALRMKDIA
FRLSLVFFVTALSLTPFIYSGVSGEGLLKAIPLGIDLAGGTNLVYQIDVDAAKKDGKNLD
INTVEQLVQAIGKRLNPSGAEEITIRRVGRDRIEVIIPGADKDIVEQKKRLITRLGSLEF
AILANARDHASIISRANQLPDGTDDLRDDKLLVASWRTVADGKNVGQNANDQTQLRVVKR
RNDKGELVDVQQFLVVHETPDKQVTGKLLQDAGYRPDQQGRPAVSFRMTTTGSIRLDALT
AKYAPDPVDKFERRLAILLDGKVYSAPNLRDRLSSGGGEITGDFDRKEVDELAGVLNAGA
LEVPLIPTPVSEFTISPLLGADVQQKGLLAIALSAAAVFIFMAVYYMVSGLVADMCLVLN
LIMVVGAMAFIDATFTLPGLAGLVLTIGMAVDANVLIYERFREEMARGASLRLTIQNGFD
KALSAIVDGNVTTLITAVILFMIGTDAVKGFAVSLFIGLSASMFAILVFGRICFDIIERK
RLVKSLSMMPTIKLNGVDFLGMRVPAILFSVVVIAVGMFALVSRGKDNLDIDFTGGTMVT
LEFQKSQETAVVREKLDAKFPTAISLEELRLNDESATAGTRFRIRTSLIDREQVRGLINE
SFADPETALTRVQLSFGDITPVTADDSKTIRIRPGTNIDKFTGGHRVPLTFTGPVAEATV
AEYLAEQLKKFPGKDSQPRYDSAIGMVLVDGVSAGGQSTTGKFTELVARVAPDVSNEDLA
EALKALATQLANEPIFDEFNSFTTSVAAETQQNALLAILLSLVAIVVYIWFRFEKLYYGF
AAVAALTHDALVVLGSVALGAWLSQTPIGPILGLEDFKINMGFIAAILTIIGYSLNDTIV
IFDRIREIRGKNPNVTYDMINLSVNQTMSRTILTATTVLIVVVILYLFGGEGIHTFAYSF
IIGTIAGTYSTIFIANPVLYWLVSRQQAKSGPAKVTA
NT seq
2994 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtttgttttcaggtttcacattgcttcaggcatcgccggctgtcgcggacgcc
ccaccaggtgccccgacggccaacgtctggttgctgggcattattgctttgtgcgtgctg
acgatccccttcctgctgggaaccctggttgcgggtgctctgcggatgaaggacatcgct
ttccgcctgagcctggtgttcttcgtgacggccttgtcactaacgccatttatctacagt
ggtgtgagtggtgaagggctacttaaagccattccactggggattgacctcgctggtgga
accaatctggtttatcagattgatgttgatgccgccaaaaaggatggaaaaaaccttgat
atcaataccgtcgaacagctcgtccaggcgattggcaagcgacttaatccttcgggtgcg
gaagagatcacgattcgtcgcgtggggcgagatcgtattgaagtcatcattcccggtgcc
gacaaagacattgtcgaacagaagaagcgattgatcacccggctgggaagtctggaattt
gccattctggccaatgcccgtgatcatgcttcgatcatcagccgggccaatcagttaccg
gatggaacagatgatcttcgtgacgacaaactgctggttgccagttggcgcaccgttgct
gatggcaagaatgtgggccagaacgcaaatgatcagacgcagttgcgggtcgtcaagcgg
cggaatgacaaaggtgaactggttgatgtccagcagtttctcgtcgttcatgaaacccct
gacaagcaggtaacgggtaagctactgcaggatgccggttatcgtcctgatcagcaggga
cgtcctgcggtttcattccgcatgacgacgacaggttcgattcgtctggatgcactcact
gccaaatatgctcccgatccagtggataagttcgagcgtcgtctggcaattcttctcgat
ggaaaagtctactcggcacctaacctccgagaccgcttgtcatctggcggcggtgagatc
acgggcgattttgatcgtaaagaagtcgatgaactcgctggagtcctcaatgcgggggct
ttggaagtccctttgattccgacgcctgtgagtgaatttacaatcagtccactccttggg
gctgatgtgcagcagaaaggtttgctggcgattgcactctcggcggctgccgtcttcatc
ttcatggcggtttactacatggtctctggtttggtggccgacatgtgtctggtgctgaac
ctgatcatggtggtgggagcgatggcgtttatcgatgccaccttcacactgcctggtttg
gctggtcttgtgttgaccattggtatggcggttgatgccaacgtgctgatttacgaacga
ttccgcgaagaaatggcccgcggcgccagtctccggctgactatccagaatggcttcgac
aaggcactttcggccattgtcgacggtaacgtgaccactctgattacggcggtcattctc
ttcatgattggcaccgatgccgtgaagggctttgccgtttcgctgtttattggtttgagt
gcgtcgatgttcgcgattctggtgtttggtcgcatctgcttcgacatcattgaacgcaag
cggctggtcaaatccttgtcgatgatgccgaccatcaagctgaacggtgtcgattttctg
gggatgcgagtaccagccatcctgttttcagtggtggtgatcgcggtcgggatgttcgct
ctggtttcacgcggcaaagacaatctcgatatcgactttactggcggtaccatggtgact
ctggaattccagaagtcacaagaaacggccgttgttcgcgagaaactcgatgccaagttc
ccgacagcaatttctctggaagaactgcggctgaacgatgaatctgcaactgcagggact
cgtttccgcatccgcacaagtttgattgatcgagaacaggttcgcggattgatcaacgag
tcgtttgcagaccctgagaccgcactcacgagagtgcagttgagttttggagacatcacg
cctgtgacggccgatgactcgaagaccattcgaatcaggccagggacgaatatcgacaag
tttaccggtgggcatcgagttccactgacgtttacaggtccggtggctgaagcgactgtc
gctgaatatctggcggaacaactcaagaagttccctggaaaagattctcagcctaggtat
gactcggcgattgggatggtgctggtcgatggtgtgagtgccggtggtcagtccacgacc
ggaaaattcacagaattggttgctcgtgtggctccggatgtctcgaatgaagatctggcc
gaggcactgaaggccttggcaacacaactggctaacgagccgatctttgatgagttcaat
tcgtttacgacctcggttgcagcagaaactcagcagaacgcactgttggccattttgttg
agtctggtggcgattgtggtttacatctggttccgctttgagaagctctattacggtttt
gctgccgttgcggcactgacacacgacgccctcgttgtgctggggagtgtggctttgggc
gcatggttgtcacagacacccatcgggccgatcctggggctggaagatttcaagatcaac
atgggcttcattgcggcgattctgaccatcattggttattcgctgaatgacaccatcgtg
atctttgatcgtatccgtgaaattcgcggcaaaaacccgaatgtcacctacgatatgatt
aatctgagcgtgaatcagaccatgtcgcgaacgattctaactgctacgactgttttgatc
gtcgtggtgattctgtatctctttggcggagaagggattcacaccttcgcctacagcttt
atcatcggaaccatcgcgggtacttatagtacgatcttcattgccaaccccgtgctgtac
tggctggtgagtcgacagcaggccaagtcgggtcctgccaaggtcacagcctga
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