Planctopirus limnophila: Plim_1374
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Entry
Plim_1374 CDS
T01225
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
plm
Planctopirus limnophila
Pathway
plm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
plm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Plim_1374
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plm03400
]
Plim_1374
Enzymes [BR:
plm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Plim_1374
DNA repair and recombination proteins [BR:
plm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Plim_1374
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
Helicase_C
PriA_C
ResIII
Zn_ribbon_PriA
PIF1
AAA_16
Kinesin
SLFN-g3_helicase
ATPase_2
vWA_LIC10012
AAA_22
AAA_30
Zot
HypA
Motif
Other DBs
NCBI-ProteinID:
ADG67208
UniProt:
D5SVD8
LinkDB
All DBs
Position
1748477..1750783
Genome browser
AA seq
768 aa
AA seq
DB search
MQSSAQQPSLFTPEDLPEVSTPWEIVDSEDQLYAEVVFNLPMLKSYHYLVPSGLRDNIRP
GSRVRVPFGTGQKLTQGYCVSLTRTRPAHRNFKSIESLLDVAPLVDAAMLRLTRWISEEY
LCSWGQVLDSVIPAGVKSKAGTRELLHFELAEGYETRLTTLKLSATQQRIVDVLRSTTEP
MAGDELTSLAECGLSPLQTLRNKGIVVSTKIRTWSKSVSSAGENDTSAILLNRNQHSAVT
RVIESLASGKSETFLLYGVTGSGKTEVYIRVIEEVVRYGRQAIVLVPEISLTPQTIRRFR
KRFASVAVLHSHLSDAERHSYWQQIARGQVQVIVGARSAIFAPAPNLGLVVIDEEHETSF
KQDSTPRYHAREVARQRVRDAGIPLILGSATPTLETWLRGIRKEEIVLSLPYRVAQRPLP
PVMIVDTRNDQSLQKGASLGRAMLVAMRESLAKKGQIILFLNVRGYSPALFCRACGQSVR
CPDCDVTLTYHKQRQIALCHSCEYSIDPPTSCPNCGKPGLLFLGQGTERLEHEVKARFPG
VSVLRMDSDTMQQKGSHDRALESFRQGEVRILLGTQMIAKGLDFPNVTLVGVIDADTSLH
QPDFRASERTFQLIAQVAGRTGRGELGGKVLVQTACPDQPAILYAARHDYAAFARQELEH
RHTLGYPPFVRILRIILRGEIEADVEKAAERIRLGMESKGLERGGMLAKILGPAPCPVAR
LKKYFRYQLQISHPSGEVLGQLWRDVEPVAPELVPVEISVDLDPISFR
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgcagtccagtgcccagcaaccatcgttgtttacgccagaagaccttcctgaggtttcg
accccctgggagatcgtggacagtgaagatcaactctacgctgaagtggttttcaacctg
cccatgctcaagtcctaccactatcttgtcccttcggggctcagagacaacatacgcccc
ggttcgagagtgcgagttccttttgggactggccagaagttgactcaagggtactgtgtc
tctttaacaaggactcgacctgcacatcgaaactttaaatcgatcgaatccttacttgat
gtcgctccactggtcgatgccgccatgttgcgactgacgagatggatcagtgaagagtac
ttgtgcagttggggtcaggtgctcgattcggtaatcccggcgggagtgaaatcgaaagcc
gggactcgtgaacttttgcacttcgaacttgccgaaggctatgaaactcgactgacaact
ctcaaattgtcggccactcagcagcgaattgtcgatgtcctgagatcaacaacggagccg
atggccggagatgaattgacctctctggcggaatgtgggctctcgcctctgcaaaccctg
cggaacaaagggattgtcgtttccaccaaaattcgcacctggtcaaagtcggtttccagc
gcaggagagaacgatacttcggccattctcctgaatcgaaatcaacactcggctgtcacc
agggtcatcgagtcgctggcatcagggaagtcggaaacttttctactctacggcgtcact
ggcagtggcaagacagaagtctatatccgcgtgattgaagaagttgtgaggtacggtcgg
caggccattgtgctggtgccggaaatcagtctcactccgcagacaatccggcgttttcgt
aagcgatttgcttcggtcgctgtattgcattctcatttgagtgatgccgagcggcatagc
tattggcagcagatcgcacgaggccaggtgcaggtgattgtcggggccagaagtgcgatt
tttgcaccggctccgaacctgggtctggtggtgatcgatgaagagcatgaaacgagtttc
aagcaggattcgacgcctcggtatcatgctcgggaggttgccaggcaacgagtgcgcgat
gccgggataccactgattcttggttctgccacaccgactctcgaaacctggcttcgcggg
attcgaaaagaagagatcgtgctttctctgccttatcgagtggctcaaaggccattgcca
cctgtgatgattgtcgatacccgcaacgatcagtcacttcagaaaggagcttctctgggg
cgagccatgctcgtggcgatgcgagaatcgttagcaaagaaggggcagattattctgttt
ctgaatgttcggggttattcgccagcactcttttgccgggcctgcgggcagagcgtgagg
tgtccggattgtgatgtcacactcacatatcataaacagcggcaaattgctctgtgccat
agctgcgagtattccatcgatccaccgaccagttgcccgaattgtggaaagcccggcctg
ttatttctcgggcaggggaccgagcggttggaacacgaagtgaaggctcgattccccggt
gtcagcgtgttgcgcatggatagtgataccatgcagcaaaaagggagccacgatcgggct
ttggaatctttccggcagggtgaggtgcggattctgctgggaacgcagatgattgccaaa
ggtctggatttccccaacgtgacactcgtgggcgtgattgatgccgatacgtctctacat
caaccggattttcgagcatctgaacgaacttttcagttgattgctcaagtcgcagggagg
accggtcgcggtgagctgggcggcaaagtgctggtgcagacagcgtgcccggatcagcca
gcgatcctgtatgccgcccggcatgattatgccgcctttgcacggcaagaacttgagcac
aggcatactttgggatacccgccgtttgtccgcatcttgcggatcattcttcgcggtgag
atcgaagccgatgtggaaaaagccgccgaaagaattcgcttgggaatggaatcgaagggg
ttggaaaggggtggcatgctggcaaagatcctcggcccggcaccttgcccagtggccaga
ctcaagaagtattttcgctaccagttgcagatttctcatccttcaggagaggttttaggt
caattgtggagagacgttgaacccgtcgcgcctgaactcgtgcccgtggaaatctctgtc
gatcttgacccgatcagctttcgctga
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