Planctopirus limnophila: Plim_1403
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Entry
Plim_1403 CDS
T01225
Name
(GenBank) extracellular solute-binding protein family 5
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
plm
Planctopirus limnophila
Pathway
plm02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
plm00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Plim_1403
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
plm02000
]
Plim_1403
Transporters [BR:
plm02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Plim_1403
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
SBP_bac_3
NBP1
CMV_1a
Motif
Other DBs
NCBI-ProteinID:
ADG67237
UniProt:
D5SVG7
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All DBs
Position
1785362..1787962
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AA seq
866 aa
AA seq
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MVGLLVGTQGCFITSSPPVANQGGGDAAAEKLTAAALKMEQAADRLAAAADRLSKLEVRV
GSGTGSAASEATASPTTAEAKPVETAASSTEAKLIREVDELYAKYPDVPRVEILKELDGI
EIPRVKAGSGKTLELGAGIPVDVGNPHAASKPSQPVKGDQVIVRFNSEPKSLNPVIEQSA
VQTYMGQYIQEALARQDNETFEFVPHLATKWIIEDSVKLSSDYPGKKYRLVLGDGSPLPS
AEIEYLPPAKKDPKAEPEVMKIVVKTVNEEGQPIAKGWVGLFPIGKILGAPTTGYHNWSN
EQGELVISGIIPGKYRVLTGSEIYGKVKPLADGAIEVTPLSEENPLKQALPPGQTSLVLK
ADEYQDIQRETWMTFYLDPRAKWSDGTPFTSTDLKFAFAVLNNNTVDCDAVRTYYSDLTD
LDALSPLVVRMRYRQQYFKAFEFGAGIGLYTPPFEFFKNRLKTQTTEPAITGYELTLDRL
TEAEEDSQKKVSAHGKRFGKFFNLDTAYNQTPLGTGPYMVESWKKTDRVILSRNDSYWLP
ERSGYLDKLIFRFLPDNTTALQSLRAGEIDFNYRMDPEQFTKDLAGPPDWFKDKFIKADW
YTPNYGYYCWNLNRPYFKDQRVRMALAMLFEKEAFLKNKMYNLGTMVSGSQYYFGPGYDH
SVKSVDYSPETARDLLATAGWIDTNRDGILDRDGVKLSFEALIPFGNPVIDDRTALLQKT
LKQVGVDMQITRIEWAAFVERLKAKDFDLVTLSWAMPVESDPFQLWHSSGATPESRGSNA
GSFANNLADELIEKIRVTLEPDKRALLNYSLHRLLDAQQPYLFLYCSKDLGAYHKRFRGV
KWYRLRPGFDLAEWYVPKDEQVHKSE
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atggtcggcctgcttgtcggaactcaaggatgtttcatcacttcgtctccacctgttgcg
aatcagggcgggggagatgcagcagccgaaaaactcactgcggcagctctcaagatggag
caggccgctgatcgactcgctgccgcagccgatcgattgtcgaagctggaagtgagggtg
ggttcagggacgggctccgcggcttccgaagcaacggcttcaccaacgacagcagaggcc
aagccagtagagacagccgcctcgtcgaccgaagccaaactgatccgcgaagttgatgag
ctctacgccaaataccccgatgtcccccgtgtcgaaatcctgaaagaactcgatggcatc
gaaattcctcgtgtcaaagccggcagcggcaaaacactagagttgggtgcaggcatacca
gtggacgtcgggaacccgcacgcggcgagcaaacccagccaaccggtcaagggtgatcag
gtcattgtgcggttcaattccgagcccaaatcgttgaaccccgtcatcgaacagtcagcg
gtccaaacctacatgggccaatatattcaggaagctctggcgcggcaggacaacgagacc
ttcgagtttgtgcctcacctcgcgacgaaatggatcatcgaagattccgtcaagctctcg
tcggattatcccggtaagaaatatcgcctcgtcctcggtgacggcagcccacttccttca
gctgaaatcgagtatctgccgcccgccaaaaaagaccccaaggccgaacctgaggtcatg
aagatcgtcgtcaaaacggtcaatgaggaaggtcagccgattgccaaaggctgggttggc
cttttccccatcggcaaaattctgggagcgccaactactggctatcacaactggagcaat
gaacaaggcgaactcgtcatcagcgggatcattcccggcaagtaccgcgtcctgacgggg
agcgagatttatggaaaagtgaagccgctagccgatggagccatcgaagtcactccgctt
tccgaagagaacccgctcaagcaggcacttccacccggccagacatcgctcgttcttaaa
gccgatgaataccaggatattcagcgcgagacgtggatgacgttttatctcgatccccga
gccaaatggtctgatggcactccctttacgagtaccgatctcaagtttgcctttgcagtc
ttgaacaacaacacagtcgactgtgatgccgttcggacctattactcagacctcacagat
ctggatgccctttcgccgctggtcgtgcgcatgcgatatcggcagcagtactttaaagcg
ttcgagtttggtgccgggattggcctctacacgcccccgtttgagttcttcaagaatcga
ctgaaaacacagaccaccgaacctgcgatcacaggctacgagctgactctcgatcgtctc
accgaagcggaagaagattctcagaagaaagtgagcgcgcacggaaagcggttcggaaaa
ttctttaatctcgacacggcctacaatcagactcctctgggaactggcccttacatggtc
gaaagctggaagaagaccgatcgcgtcattctgagcagaaatgacagctactggctgccc
gaacgcagtggttaccttgataagctgatcttccgttttctccccgataatacgaccgcg
ctgcaatcgttgcgtgccggtgaaatcgacttcaattaccggatggaccccgagcagttc
accaaggatctcgctggtccgcccgattggttcaaagacaagttcatcaaagccgattgg
tacaccccgaactacggctactactgctggaatctcaaccggccctacttcaaagaccag
cgcgtccgcatggctctggctatgctgttcgagaaagaagcgttcctgaaaaacaagatg
tacaatctgggaacgatggtcagtggcagccagtattactttggtcccggctatgaccac
tcggtcaaatcggtcgattacagtcctgaaacggctcgcgatctcctcgcgaccgctggg
tggatcgatacaaatcgggatggcattcttgaccgagacggtgtgaaactcagcttcgaa
gctctgatcccttttggaaatccagttattgatgaccgtacggcactcctgcagaaaaca
ctcaagcaggttggggtcgacatgcaaattacccgcatcgaatgggcagcttttgtcgaa
cgtctcaaagccaaggatttcgatctcgtcacactttcgtgggccatgcctgttgagagt
gatcccttccagctctggcacagttcgggagctacgcctgaatcgcgaggcagtaatgcc
ggctcttttgcgaacaatctggccgatgaactgatcgagaaaattcgagtcacgcttgaa
cccgataagcgggcgcttctgaactattcactccatcgactgctcgatgcccagcagccc
tatttgttcctctattgctcaaaagacctgggggcatatcacaaacgcttccggggggtg
aagtggtatcgtctgcggcccggttttgatctggctgagtggtatgtccccaaggatgag
caggttcataagtcggaataa
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