Planctopirus limnophila: Plim_1596
Help
Entry
Plim_1596 CDS
T01225
Name
(GenBank) secretion protein HlyD family protein
KO
K02005
HlyD family secretion protein
Organism
plm
Planctopirus limnophila
Brite
KEGG Orthology (KO) [BR:
plm00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99992 Structural proteins
Plim_1596
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSH_RND
HH_YBHG
Beta-barrel_RND_2
BSH_CzcB
BSH_CusB
BSH_YknX
Beta-barrel_YknX
HH_MFP_RND
BSH_YhbJ
Beta-barrel_AprE
V-SNARE
Biotin_lipoyl
DUF1090
BSH_Fcp1
HH_EMRA
ATP-synt_DE
BSH_LcnD
Motif
Other DBs
NCBI-ProteinID:
ADG67429
UniProt:
D5SWS9
LinkDB
All DBs
Position
2065852..2067114
Genome browser
AA seq
420 aa
AA seq
DB search
MDSAGTARDALSAAMVERVQGLRLPPPPANAGINASTSIAWLIATLSISGFVFIFLFAFV
YQVGGPRGSNAPASTTVAGDGKTTTAGSKKDPSAPANSDARPVDAAAVDPEAMVLLSQGY
IIPEQQILVSPQVSGRIIELNVKEGTRVEKGFVLAKLEPTEYRADYEGARANVAAAEARL
AELREGNRPEEIAQAQAELGEAKATLKQLEQTFRRNAELYGQKILNKQEFEDSESLLMAQ
AQRVLKLEAMVKLAEDGFRKERKLEGEANLHKAMAELERAKWRLDNCTIAAPISGTILKK
NAEEGNIVNPVAFNGSFSLCDLADLSKLEVDLTIQERDISKVFPGQKCKVRSEAFPDRAY
DGVVSRLMPIADRAKGAIPVRVAISVPADEEGMYLKPEMSAQVTFYAGKAETKPATMSAE
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggactctgcaggtactgcccgtgatgcgttatccgctgcgatggttgaacgcgtacag
ggattgcgtctaccgccaccccctgccaatgcgggaatcaacgcttccacctcgattgcc
tggctgattgccacactatcgatttctggtttcgtgtttatcttcctgttcgcctttgtc
taccaggtgggtggccctcgcggcagcaatgccccagcctcgacgaccgtcgctggtgat
gggaagaccacaactgcggggtccaaaaaggatccctcagctcctgcaaacagtgatgcc
cgtcccgtcgacgctgctgctgtcgatccggaagcgatggtgctcttgtcacagggttat
atcatcccggaacagcagattctggtcagcccgcaggtgagtggccggattattgaattg
aacgtcaaggaaggaactcgcgtggaaaaaggattcgtcctcgcgaaactggaacccacg
gaatatcgggctgattatgaaggagccagagccaacgtggctgctgctgaagccaggctg
gctgagttgcgtgaaggaaaccggcccgaggaaatcgctcaagctcaggccgaactgggc
gaagccaaagcgacattaaaacagctggaacaaaccttccgccgcaatgccgagctctac
ggacaaaagattctcaacaagcaggagtttgaagattcggagtcactgctcatggcccag
gcccagcgcgtgctcaagctggaagcgatggtcaagctggccgaagatggcttccgtaaa
gagcggaaactggaaggtgaagcgaacctgcataaagcgatggcagaactggaaagagcc
aagtggcgcctggataactgcacgatcgcggcaccaatctccggcacgattctgaagaaa
aatgccgaagaggggaacattgtgaaccccgtagctttcaatggctctttcagtttgtgc
gacctggccgatctttcgaagctcgaagtcgatctgaccattcaggaacgggatatttcg
aaggttttcccgggccagaaatgcaaagtccgttcggaagcttttcccgatcgcgcttac
gacggtgtggtctcacgattgatgcccattgcagacagagccaaaggggccattcctgtt
cgtgtggcgatcagtgtcccagccgatgaagagggcatgtacctgaagcccgaaatgagt
gcccaggtgacgttctatgccggaaaagcagaaacaaaacctgccacgatgagtgccgaa
taa
DBGET
integrated database retrieval system
