Planctopirus limnophila: Plim_2084
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Entry
Plim_2084 CDS
T01225
Name
(GenBank) sigma-54 factor interaction domain-containing protein
Organism
plm
Planctopirus limnophila
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Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
Mg_chelatase
AAA_5
AAA
AAA_2
Phage_CP76
AAA_7
AAA_16
VpsR
AAA_22
MCM
Motif
Other DBs
NCBI-ProteinID:
ADG67911
UniProt:
D5SYX9
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Position
complement(2704463..2705896)
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AA seq
477 aa
AA seq
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MMPLEGQGESPLGTMTSNKLRVLFVDDEAAIRSVMKIELPRMGHDVTFCEDGESALKVLE
NHTFDAAIVDLRMPGISGWDVIDHIKKVSPETEVIISTGHGDLEAAIQAVRKGAYDFLPK
PCKLFEISAALKRVAEKRTLTNKAIALETRLKAVEGAPDIIGKTPSMQRVKRMIEKIAPT
DSAVLILGETGTGKELVARRVHELSHRAQMPFVAVNCGALPDNLVESELFGHRKGAFTGA
DTPRKGLIEVANGGTLFLDELGELDKSMQVKLLRFLESGEVRRVGENEAFHVDVRIVCAT
NRDLESMVREGAFREDLFFRVNTFEIRLPPLRERKEDLPDVSRNLIARHLKRRDVPPEIL
APETIEALQSHDWSGNIRELANALEHAVILADGGVILPEHLPGAITRQRSAVLTGNKAVE
AAFSSGSPKTLREIEMEVIYQVLEKHKGDKVKVAAELGIALKTLYNKLNGDQTRAAS
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgatgcctctggaagggcaaggagaaagcccgttgggtacgatgacatcaaacaaactg
cgtgtgctgttcgtggatgatgaggcggctatccgcagtgtgatgaagatcgaattgcca
cgcatggggcacgatgtcacattttgcgaagatggtgaatccgcactcaaggtgctggag
aatcataccttcgatgctgcgattgtggatctgcggatgccagggatcagtggctgggat
gtgattgatcacatcaaaaaagtttctccggaaactgaagtgattatcagtacgggtcat
ggtgatcttgaggcggccattcaggctgttcgcaagggggcttacgattttctgcccaag
ccctgcaagctgtttgagatttctgctgcattaaaaagagttgctgaaaaacggactctc
accaataaagcgattgctctggaaacgcgattgaaggcggtcgaaggagcaccagatatc
attggcaaaacgccatcgatgcagcgtgtcaaacggatgatcgaaaagattgctccgaca
gattcggctgtgttaattctgggtgagaccgggactggcaaggaactggtggctcgtcgg
gtgcatgagttaagccatcgtgctcagatgccgtttgtggctgtgaattgtggagcgctc
ccggataacctggtggagagcgaactgttcggccaccggaaaggtgccttcaccggggcg
gatacacctcggaaaggactcatcgaggtggcgaacggagggacgctcttcctggatgaa
ctgggagaactcgataagtcgatgcaggtcaagctgctgagatttttagagtctggtgaa
gttcgtcgtgtgggtgagaacgaagcttttcatgtggatgttcgcatcgtctgtgcaaca
aatcgtgacctcgaatcgatggttcgcgaaggagcttttcgggaagatttgttctttcgt
gtgaatacgttcgagattcggctccctccgctgcgcgaacggaaagaagatcttccagat
gtgtctcgcaatctgattgccagacatctcaaacggcgtgacgtgccacccgagattctg
gcaccagagacgatcgaagcattgcaatcacacgactggagtggaaacattcgtgaactc
gccaatgcattggagcatgcggtgattctggctgacggtggagtgatccttcccgagcat
cttcccggcgcgatcacccgtcagcgatctgccgttctgactggcaataaggcagtagaa
gctgcgttttccagcggttctcccaagaccttgcgggagattgaaatggaagtcatctat
caggttctggagaagcacaaaggtgacaaagtcaaggtggctgccgagttgggcatagct
cttaagacgttatacaacaagctcaacggtgatcagactcgtgctgccagttga
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