Planctopirus limnophila: Plim_2095
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Entry
Plim_2095 CDS
T01225
Name
(GenBank) Metal-dependent hydrolase of the beta-lactamase superfamily III-like protein
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
plm
Planctopirus limnophila
Brite
KEGG Orthology (KO) [BR:
plm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
plm03016
]
Plim_2095
Enzymes [BR:
plm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
Plim_2095
Transfer RNA biogenesis [BR:
plm03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
Plim_2095
Prokaryotic type
Plim_2095
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
PDEase_II
Lactamase_B
Lactamase_B_6
Motif
Other DBs
NCBI-ProteinID:
ADG67922
UniProt:
D5SYZ0
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Position
complement(2719551..2720282)
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AA seq
243 aa
AA seq
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MEVIFLGTGGYHPNERRHTAGVAIPEARIVFDAGTSAFRIPKVMPPGELNVFLSHAHLDH
VCGLTYLLAPLLTGYFTSCRLYGTAATLHAVRTHLFAEPIFPILPGFEFCILEDVISCSD
CVITSRSMVHPGGSMAFRLEKNSKALAYVTDTTANESYLDWIREVDLLIHECSFRDADEK
WCQPTGHSHTSAVARLALAAKVQQLYLTHIDPRDLSDDPVDLDQARQIFPKTVVAEDLLV
VRL
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgattttcctgggcaccggggggtatcaccccaatgaaagacggcatacggcg
ggagtggccatccctgaagctcgaattgtctttgatgcgggcacgagcgccttccgtatt
cccaaggtcatgccacctggggaattgaatgtcttcctctcccatgcccatcttgaccat
gtgtgtggtctgacttacctgctggcaccattgctcactgggtactttaccagttgcagg
ctgtatggcaccgcagccacacttcatgccgttcgcactcatctgtttgcggaaccgatt
tttcccattcttcccgggttcgagttctgcattcttgaggatgtgatttcttgcagtgac
tgtgtcattacctctcgatcgatggtgcatccgggaggatcgatggccttccgtctcgaa
aaaaattcaaaggcgctggcctatgtgacagataccacggcgaacgagagctatctcgat
tggattcgcgaagtggatctgctgattcacgaatgctcatttcgtgatgctgacgagaaa
tggtgccagccgacaggccatagccataccagtgcagtcgcccggctggcactggctgcg
aaagtccagcagctttacctgactcacatcgatccgcgcgatctgagtgacgatccggtc
gatctcgatcaggcacgtcagatcttccccaaaactgttgtggcagaagatctcctcgtc
gttcggctttag
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