Planctopirus limnophila: Plim_2197
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Entry
Plim_2197 CDS
T01225
Name
(GenBank) tyrosyl-tRNA synthetase
KO
K01866
tyrosyl-tRNA synthetase [EC:
6.1.1.1
]
Organism
plm
Planctopirus limnophila
Pathway
plm00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
plm00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Plim_2197
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
plm01007
]
Plim_2197
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
plm03016
]
Plim_2197
03029 Mitochondrial biogenesis [BR:
plm03029
]
Plim_2197
Enzymes [BR:
plm01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.1 tyrosine---tRNA ligase
Plim_2197
Amino acid related enzymes [BR:
plm01007
]
Aminoacyl-tRNA synthetase
Class I (A)
Plim_2197
Transfer RNA biogenesis [BR:
plm03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Plim_2197
Prokaryotic type
Plim_2197
Mitochondrial biogenesis [BR:
plm03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
Plim_2197
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
TyrRSs_C
S4
Motif
Other DBs
NCBI-ProteinID:
ADG68023
UniProt:
D5SMW8
LinkDB
All DBs
Position
2830160..2831404
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AA seq
414 aa
AA seq
DB search
MSDAQPALAFPPVEDQLKVILRGVEKVVPEEELARKLAKSRETGRPLRIKYGIDPTGIDV
HLGHTVPLRKLRQFQELGHQAVLIIGNFTAMVGDPSGRDQARAKRLSAEEVEANATDYLK
QVGKVIDLSKTEIHRNGEWFSKMTFADILTLCSKVTVAQLLTRDDFAKRYASQSPIFLHE
CLYPVMQAWDSVEIKSDIELGGTEQLYSFMLARDLQRDQQLEQQLGVMSPILVGLDGKRR
MGKSLGNYIGIAESPLAMMKKFMQIPDEVMPMYFELLTNIPLDEVQQLLAGHPKLAKQRL
AREVIAQYHTSTAGDEAIQQWEAEVSAGALPADIEQVTIEASVVSNGTVTAAILFKQAGL
CPTTSDARRLISQGGAYFGDDLQVISSHDQAIPITNGLLLKAGKKRYARLNLPS
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacgctcagcccgcccttgcctttcccccggttgaagatcaactcaaggtgatc
ttgcggggagtcgagaaagtggttcccgaagaggaactggctcgcaagttggcaaaaagc
cgagaaaccggccgtccgctgcgaatcaagtacggcatcgaccccacggggattgatgtg
catctggggcataccgttcctttgagaaagctgaggcagttccaggaactgggtcaccag
gctgtgctgatcattggcaacttcaccgccatggtgggtgaccccagtgggcgcgaccag
gcccgggccaaacgtctctcagccgaagaagtcgaagccaacgcgacagattatctgaag
caggtgggtaaagttattgatctctcgaaaaccgaaattcaccgcaatggtgaatggttt
tccaagatgacttttgccgacattctcacgctgtgcagcaaggtgactgtcgcccagctt
ttgacacgcgatgactttgccaaacgctatgccagccagtcacccattttcctgcacgaa
tgcctttaccctgtgatgcaggcctgggattccgtcgagatcaagtccgatatcgaactg
ggcggcaccgagcagctttacagctttatgctggctcgcgatctgcagcgtgaccagcag
cttgaacagcagttaggggtgatgtcccccattctggttgggctcgatggcaaaagacgc
atggggaagagcctggggaattacatcggcattgctgagtcaccactggccatgatgaaa
aagttcatgcagattcccgatgaagtcatgcccatgtacttcgaactgttgacgaatatc
ccccttgatgaagttcagcaactcttggcaggtcatcccaaactggcaaaacaacgcctc
gccagagaagtcattgcccaataccatacctcgacagcaggcgatgaagcgattcagcaa
tgggaagcggaagtcagtgccggtgccctccccgccgacattgaacaagtcaccatcgag
gcctccgttgtttctaatggaactgtgacagccgcaatccttttcaaacaggcggggctg
tgccccacaacttccgatgcgaggcggctgatcagccagggaggtgcctactttggggac
gatctccaggtgatcagttctcatgaccaggcgatcccgatcacgaatggtctgcttctc
aaagccggcaaaaagcgttacgccaggcttaacctccccagctga
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