Planctopirus limnophila: Plim_2244
Help
Entry
Plim_2244 CDS
T01225
Name
(GenBank) Phytoene synthase
KO
K02291
15-cis-phytoene synthase [EC:
2.5.1.32
]
Organism
plm
Planctopirus limnophila
Pathway
plm00906
Carotenoid biosynthesis
plm01100
Metabolic pathways
plm01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
plm00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
Plim_2244
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
plm01006
]
Plim_2244
Enzymes [BR:
plm01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.32 15-cis-phytoene synthase
Plim_2244
Prenyltransferases [BR:
plm01006
]
Terpene biosynthesis
Squalene/phytoene synthase
Plim_2244
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-ProteinID:
ADG68070
UniProt:
D5SNF6
LinkDB
All DBs
Position
complement(2895411..2896322)
Genome browser
AA seq
303 aa
AA seq
DB search
MAPAPASESLPQSARQLSVAESFQWAEEVTRRSRSNFRWSFFTLDRQRRQAMEALYSFMR
LTDDLGDNEGLSISERTEQLIAWRKMLDAALAGESQPHPLMPALVDTISRYQIPACYLHD
VITGVEMDLHPVQLKSWAELEKYAYHVAGAVGLCCIHIWGFQEDQAQARALACGRAMQYT
NILRDVNSDLALGRVYLPEELLRQHRYSLDDLRQRAYTAPFVSAMREFAEVTRANYREAA
LLVSELEPPGRPILRVMLDTYQTLLERIEHAEFRVFEQRIRVPVWQKLWFVGRTFLPGGF
RRP
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggctcctgcccctgcatccgagagtttaccgcagtctgctcgccagctcagcgtggcg
gaatcgttccagtgggccgaagaggtcaccaggcgatcccgatccaattttcgctggtct
tttttcacactggatcgtcagcggcggcaggctatggaagccttatacagcttcatgcga
ctgactgatgacctgggggataacgaggggctatcgatctctgagcgaactgagcaactg
atcgcctggcgaaaaatgctggacgctgccctggctggcgagagtcagccacatccttta
atgccggctctggtggatacgatttccaggtaccagatcccagcctgttatctgcatgat
gtgatcactggagtcgagatggatttacatccagttcaactcaagagctgggccgaactg
gaaaagtatgcctatcatgtcgcgggagctgtggggctgtgctgtattcacatctgggga
tttcaagaggatcaagcacaggcccgggcactcgcctgtggcagagccatgcagtacacg
aacatcctgcgcgatgtgaacagtgatcttgctctggggagagtttacctaccagaagaa
ttactgcgtcagcatcgatactctcttgatgacttgcggcaaagggcgtacacggcaccg
tttgtcagtgcgatgcgagagtttgccgaggtgaccagggctaactacagggaggcagca
ctgctggtgagtgaactggagccaccgggcaggccgattcttcgggtgatgctcgatact
taccagactttgctggaacggattgaacatgcagagttccgtgttttcgaacagcgaatt
cgtgttccggtctggcagaaactctggtttgtaggccgcaccttcctgccaggtggattt
cgcaggccgtga
DBGET
integrated database retrieval system
