Planctopirus limnophila: Plim_2361
Help
Entry
Plim_2361 CDS
T01225
Name
(GenBank) ATP-dependent nuclease subunit B-like protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
plm
Planctopirus limnophila
Brite
KEGG Orthology (KO) [BR:
plm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plm03400
]
Plim_2361
Enzymes [BR:
plm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Plim_2361
DNA repair and recombination proteins [BR:
plm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
Plim_2361
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
ADDB_N
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
ADG68187
UniProt:
D5SP43
LinkDB
All DBs
Position
3068559..3071900
Genome browser
AA seq
1113 aa
AA seq
DB search
MLEILTGTGAARHQEALARYASHLGQGLADGQLGTGLWLTPSARTHSKTYQALLELLKGK
IAAPNLHTFESFSEIILSHGSAAATPITPSTQFLLLSHAIQTVYQRGDCEEFSAVIETRG
LTKIVSDWIAELKRDETWPEEFLKSCQQQKGGATGKDLALAAIYHEYQALLNARGWYDQE
GRSWLARAAVSQGARAPFDQVRLVVCDGFVDFTWIQYELLEQFARWNADIVITLPDEFAS
QRNTSFDRSELFAIPRRTLEILKSRIKPLQEIRVHSISTNPDHGAVPTGIEQLARNLFGN
PRIVSRCSTAAGFDAIAAGGPHRELEAVSHQIKKWRSSGFLAEEIVVVVRGLASEASRWL
DHFELAGIPAYAPQASSLESCPVVRWMAQLVKLELNDWTSHDLRLVVSSTFFRPAQFPSK
AKRALLAWLAKSPASSRKILSLKARERAADPSALTTEKEINHTLVSQGLETLLRVTEKLS
TSHSFEGWIDLWAAIISQWTPFLPDSSNDRADRADWELLQRILRRVSRCRGTWQEPSERL
SLQAWWSEVEACLSVERSLPPAPSPGMISLIDPAQARFLDSARCVVIVGATEQAYPAADH
TNCLYSHAERQSLIAAGLRLVREEDHSSEETLLFWQLVSMATENLLITYPAINAKGQELF
PSPFVLAACDLFTKDVQLPRHVGSIHVMPEREEIHTRRDLRIVAFEQAMTGHAGWWKTGL
LDTTEGQAYRNMARGLPMLQARYRTEGFTEYEGMLNEPALREEFARQYGPEHQFSVTRLE
LYANCPFRFWIEEVLGLAPRETKQLSTNYLMRGTALHSALASLLGSGRLALADEAELSRI
FAEHVAVEMQRRAKGSPLAEAMARLDSQIVSAWSEQFAASQREYLETMVSAWGGMPETTL
PEVAFGQVYDDHGELIHGPYPALEISRGGHLVRLGGKIDRIDAHKLPTGEQFFSIIDYKS
GGASQYRFDEKAVQQGLSLQLVVYLLAVKRLRMAGDDAEAWQAGFWGLRKEGLVAGLKAG
RKSKEWNRLDEDSVHRLEEAVQQSVIDLAISIRNGEFMVDGATKLKPSPCSSQCPTATVC
RVKQQVGLAKQLHKIRPALDAPRATSPVESPAS
NT seq
3342 nt
NT seq
+upstream
nt +downstream
nt
atgcttgagattttgactggcactggtgccgcacgtcatcaggaggcactggcgcgctat
gccagtcatcttggtcagggtctcgcagacggtcaattggggactggcctgtggctcaca
ccctcggcacgcacgcactcgaagacttatcaggctttgctggaattactgaagggcaag
attgccgcccccaacctgcatacgtttgagtcgttctctgagatcattctgagtcatggg
tctgcggcagcgactcccattacgccatccacgcagtttctgctgctgtcacacgcgatc
cagaccgtctatcagcggggcgactgcgaggagttcagcgctgtcatcgagactcggggt
ttgacaaaaatcgtcagtgactggattgccgagcttaagcgggatgaaacgtggcctgag
gaatttctcaaaagctgccagcagcaaaaagggggcgcgacaggcaaggatctggcactg
gcggcgatttatcacgaataccaggcattgctcaatgcacgcggctggtacgatcaggaa
ggtcgatcgtggttagctcgggcagccgtctcccagggagccagggcacctttcgatcag
gtgcggcttgtggtctgcgatggtttcgtcgacttcacgtggattcagtacgagttactc
gagcaatttgcgagatggaacgccgacattgtcatcaccttgcccgatgaattcgccagc
cagcggaatacgtcttttgatcgaagcgaactgtttgcgattcctcgccgaacacttgag
attctgaagtcgcgaatcaaacccctgcaagagattcgagtccactcgatatcgacaaat
ccagatcatggagctgttcctacgggaatcgaacaacttgcacggaatctttttggtaac
ccgcgaattgtcagccgatgttcaacggctgccgggtttgatgcgattgctgcgggtggg
ccgcatcgcgagctggaggcggtcagtcatcagatcaagaagtggcgttcgagtggtttt
ttggccgaagagatcgtggttgtggttcgaggcctggcgagtgaagcctcgcgctggctg
gatcatttcgaattggcggggataccggcttatgctcctcaggcctcatcgctggaaagc
tgtcccgtcgtgcgctggatggctcaactggtcaaactggaattgaatgactggacgagc
cacgacctgcgtctggtcgtctcatcgacattttttcgccctgcccagtttccctccaaa
gccaagcgggccttattggcgtggctggcgaaatcacccgcttcgagccgcaaaattctt
agcttgaaagcccgcgaacgggcggcagatcccagcgcattgacaactgagaaagagatc
aatcacacgctggtcagtcaggggttggaaacactgctgcgtgtgaccgagaaactcagt
acatcgcacagctttgaagggtggattgatctgtgggcggcgatcatcagtcaatggaca
cccttcttgccggattcatcaaacgatagggcagatcgtgcggattgggaacttctgcaa
aggattctccgccgggtttctcgctgccgggggacatggcaagagccttccgaacgactc
agtctgcaggcgtggtggagcgaagtcgaagcctgcctgagtgtggaacgcagtttgcct
ccggctccatccccaggaatgatttcgctgattgatccggcccaggcacgatttctcgat
tcagcgcggtgcgtcgtgattgtgggtgcgaccgaacaggcttacccggcggcagatcat
accaattgcctttacagtcatgccgagcgtcaaagcctgattgcagcgggtcttcggctg
gtacgggaagaggatcattcttccgaagagacgctgcttttctggcaactggtctccatg
gccacggagaatctgctgatcacctatcccgcgatcaatgccaaaggacaggagcttttt
cccagcccatttgtgctggcggcctgcgacctattcacaaaagacgtgcagttgccccgg
catgtgggatcgatccatgtcatgccggagcgggaagagattcatacccgccgggacttg
cgcattgtggcgtttgagcaggcgatgacaggccatgcgggctggtggaagacgggtttg
ctggacacgaccgagggtcaggcctatcggaatatggctcgcggtctccccatgctgcag
gctcgatatcgaacagaaggctttactgagtacgagggaatgctcaacgaacctgctctt
cgcgaggagtttgcgcgccaatatgggccagagcatcaattcagcgtgacgagattagaa
ctttatgccaattgtccgtttcgattctggatcgaagaggtgctgggactcgcgccacgt
gagacaaagcaactctcgacgaattacctcatgagagggactgctcttcatagtgcctta
gcgtccctattgggaagtggccggctggcattggctgatgaagcggaattgagccggatt
tttgccgaacatgtggctgtcgaaatgcagcgccgggcgaaaggttctccgctggcagaa
gccatggcccggctggattcccagattgtcagtgcgtggagcgaacaatttgctgcgtca
caaagagagtatctggaaacgatggtcagtgcctggggaggcatgcccgaaaccacattg
ccggaagttgcctttggacaggtttacgatgatcacggggagttgattcacgggccgtac
cctgccctggagatttcgcgaggcgggcatctggtacggctgggtggcaagatcgaccgg
attgatgctcacaaacttcctactggtgagcagttcttttcgattatcgattacaaatcg
ggcggggcgagccaataccggttcgacgaaaaggctgtgcagcagggattgagcctgcag
ctggtggtctatctgctggctgtaaaacgattgagaatggcgggagatgatgctgaagca
tggcaggcgggcttctggggattgcgaaaagaaggcctcgtggcaggtttgaaagccggg
aggaagtccaaagaatggaatcgcctcgatgaagattctgtccaccggcttgaagaggct
gtccagcaaagtgtgattgatctggccatcagtattcgcaatggtgaattcatggtcgat
ggagcgaccaaattgaaacccagcccttgcagcagtcaatgtccgaccgcgacagtgtgc
cgggtgaaacagcaggtcggcctcgcgaaacagctccataaaattcggccagcactggat
gcgccgcgggcgaccagccctgtcgaaagtccagcctcctga
DBGET
integrated database retrieval system
