Planctopirus limnophila: Plim_2524
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Entry
Plim_2524 CDS
T01225
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
plm
Planctopirus limnophila
Pathway
plm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
plm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Plim_2524
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plm03019
]
Plim_2524
03110 Chaperones and folding catalysts [BR:
plm03110
]
Plim_2524
03029 Mitochondrial biogenesis [BR:
plm03029
]
Plim_2524
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
plm04147
]
Plim_2524
Enzymes [BR:
plm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Plim_2524
Messenger RNA biogenesis [BR:
plm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Plim_2524
Chaperones and folding catalysts [BR:
plm03110
]
Heat shock proteins
HSP60 / Chaperonin
Plim_2524
Mitochondrial biogenesis [BR:
plm03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Plim_2524
Exosome [BR:
plm04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Plim_2524
Exosomal proteins of other body fluids (saliva and urine)
Plim_2524
Exosomal proteins of breast cancer cells
Plim_2524
Exosomal proteins of colorectal cancer cells
Plim_2524
Exosomal proteins of bladder cancer cells
Plim_2524
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
AAA_PrkA
Motif
Other DBs
NCBI-ProteinID:
ADG68350
UniProt:
D5SPX5
LinkDB
All DBs
Position
3283652..3285271
Genome browser
AA seq
539 aa
AA seq
DB search
MAKILAFDQEAQEAMRRGVSKLAKTVRVTLGPRGRNVIIEKSFGSPTVTKDGVTVAKEVE
LADKFEDMGARMVREVASKTSDNAGDGTTTATVLAEAIYVEGLKAVVAGVNPIDLKRGMD
KAVEQIVGKLKAAAVECKSKKAIAQVGTVAANGDTEIGDILANAMEQVGKDGVITVDEGK
SLKTDFEVVEGMQFDRGYLSPYFVTDPQTMECVLEDAYVLIHEKKISSIKDLVPVLEKVV
NSGKPLLIVAEEVDGEALATLVINKLRGTFKISAVKAPGYGDRRKAMLQDLAIMVGGQAI
FEDLGIQLENVQLSDLGRAKRIVIDKDNTTIIEGAGKAADVKSRIEQIRRELASSTSDYD
KEKLEERIAKLSGGVARVNVGAATESEMKEKKARVEDALHATRAAVEEGILPGGGVALLR
ASLDLKPTGLNHDETAGFNIILRACRAPLTQISNNAGVDGAVICEKVSELKGNMGYNAAT
GEYEDLVKSGIIDPVKVTRTALQNAASVSTLLLTSDCLIAEKPKAEDKAHGGHGDHDMY
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggccaagattcttgcatttgaccaggaagcccaggaagcgatgcgtcgcggcgtcagc
aagctcgccaagaccgtccgcgttactctcggcccacgcggccgcaacgtgatcatcgaa
aagagcttcggctcccccactgtcaccaaggacggcgtaaccgtcgccaaggaagtcgaa
ctggccgataagttcgaagacatgggcgcccgcatggttcgcgaagtcgcttccaagacc
agcgataacgctggcgatggtacgaccaccgcaactgttctcgccgaagccatctacgtc
gaaggcctcaaggctgtcgtcgctggtgtgaaccccatcgacctcaagcgcggcatggat
aaggccgtcgagcagatcgtcggcaagctcaaggctgccgccgtcgagtgcaagagcaag
aaggccatcgcccaggtcgggactgtcgctgctaatggcgataccgaaatcggcgatatc
ctcgccaacgccatggaacaggtcggcaaagacggcgtcatcactgtcgacgaaggcaag
agcctcaagaccgatttcgaagtcgtcgaagggatgcagttcgatcgcggctacctctcc
ccctacttcgtcaccgatccccagacgatggaatgcgtcctcgaagacgcttatgtcctg
atccacgaaaagaagatcagcagcatcaaggatctcgtccctgtgctggagaaggtcgtc
aacagcggcaagccactcctcatcgtcgctgaagaagtcgatggtgaagccctcgccaca
ctggtgatcaacaagctccgcggcaccttcaagatctccgccgtcaaggctcccggctac
ggcgaccgccgcaaggccatgctccaggatctcgcgatcatggtcggcggccaggcgatc
ttcgaagacctcggcatccagctcgaaaacgtccaactctccgatctcggccgcgccaag
cggatcgtcatcgacaaggacaacaccaccatcatcgaaggggccggcaaggctgccgac
gtcaagagccgcatcgagcagatccgtcgtgaactggccagttcgaccagcgactacgac
aaggaaaagctcgaagagcgtattgccaagctctccggcggcgtggcccgcgtgaatgtc
ggtgctgccaccgaaagcgaaatgaaggaaaagaaggcccgcgttgaagacgctctgcac
gccacccgcgctgctgttgaagaaggcattcttcctggtggtggggtcgccctgctccgc
gcttcgctcgacctcaagcccactggcctgaaccatgatgaaaccgccggtttcaacatc
atcttgcgggcttgccgggcacctctcacacagatctcgaacaacgccggcgtcgacggc
gcggtgatctgcgagaaggtttccgagctcaaggggaacatgggctacaacgccgccacc
ggcgagtacgaagacctcgtcaagagcgggatcatcgacccagtgaaggtgacccgcacc
gctctccagaacgcagccagcgtctcgaccctgctgctgaccagcgactgcctgatcgcc
gagaagcccaaggccgaagataaagcccacggcggccacggcgaccatgacatgtactaa
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integrated database retrieval system
