Planctopirus limnophila: Plim_2559
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Entry
Plim_2559 CDS
T01225
Name
(GenBank) transcription termination factor NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
plm
Planctopirus limnophila
Brite
KEGG Orthology (KO) [BR:
plm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plm03021
]
Plim_2559
03009 Ribosome biogenesis [BR:
plm03009
]
Plim_2559
Transcription machinery [BR:
plm03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
Plim_2559
Ribosome biogenesis [BR:
plm03009
]
Prokaryotic type
rRNA transcription factors
Plim_2559
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_5
NusA_N
S1
HHH_5
KH_NusA_C
KH_2
Cdd1
DUF2680
HHH_2
DNA_pol_lambd_f
Motif
Other DBs
NCBI-ProteinID:
ADG68384
UniProt:
D5SQ09
Structure
PDB
PDBj
LinkDB
All DBs
Position
complement(3328869..3330197)
Genome browser
AA seq
442 aa
AA seq
DB search
MNGNEVLRIVDSIHRDKSIDKEIVFEGVEQAILSAARKHFGEEEVIEVHIDRTSGQPMVK
TNGREIDRDELGDILGRISAQTAKQVMIQKIREAERDTLFDEYAQLRGQIVSGTVTRNEG
SAITVNIGKAEAILPRSEMIPGESHRPNERIRAVVLEVKKMGPRVRVVLSRAHPDFVRRL
LELEIPEVNERIIEIRSLAREAGYRTKVAVSCADSNIDPVGACVGVRGARIRNVGEELGG
ERIEVVRWNDSLQVLVPNAMQPSEVEDVILCPMLGRVLVLVRDDQLSLAIGKRGQNVRLA
SKLVGWDIDVMTREELDQQLDQAVVAYSQIPGVSEELAEGLVSQGFLSFEDLSVIEPDEL
MEMGSLTQEQADVIVEYAERESERIEKEQDLRRATEKAERQSQEREQRRADEARASNPAV
ESKLPPAADNEASVEEAAGNKS
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgaacggcaatgaagtgctgcggatcgtggattcgatccatcgcgataagagcatcgac
aaggaaattgtcttcgaaggggtggagcaagccattctttcggctgcgcggaagcacttt
ggtgaagaagaagtcatcgaggttcatattgatcgcaccagcggtcaaccaatggtgaaa
accaatggtcgcgaaattgaccgcgatgaactgggtgatattctcggtcgcatctcggct
caaactgccaagcaggttatgatccagaagattcgcgaagccgagcgtgacacgttgttc
gatgaatacgcccagttgcgagggcagattgtctccgggacagtgactcgcaatgaggga
agtgccattacggtcaacattggcaaggcggaagcgattctgcctcgcagtgaaatgatc
ccgggtgaatcgcatcgtccgaatgagcgaattcgtgccgtggtgctggaagtcaagaag
atggggcctcgcgttcgcgtggtgctgtcccgagcacatcccgattttgttcgccgtttg
cttgaactggaaattcccgaggtcaacgagaggattatcgagatccggtctctggctcgg
gaagctggatatcgaacaaaagtggcggtctcctgtgccgacagcaatatcgacccggtt
ggtgcctgcgtgggtgtgcgcggtgcccgcattcgcaatgtgggcgaagagctgggtggc
gagcggattgaagttgttcgctggaacgattccctccaggtgctggtcccgaatgcgatg
cagccctcggaagtggaagatgtgattctttgcccgatgctgggccgtgtgctggtgctg
gtgcgggatgatcagctttctctggcgattggcaaacgcggtcagaatgtgcgtctggct
tcgaagctggtgggctgggacatcgacgtgatgactcgcgaagagctggatcagcagctt
gatcaggctgtggtggcctactcgcagatcccgggagtttccgaggagctggcggaaggg
ctggtatcgcaaggttttctgagttttgaagacctgtctgtcatcgagcccgacgagctg
atggagatgggctcgttaactcaagagcaggccgatgtgattgttgagtatgccgaacgc
gaaagcgagcggatcgagaaggagcaggatcttcgtcgggcgaccgagaaggccgaacgg
caatctcaggagcgcgagcagcgccgggccgatgaggcccgcgcctcgaatcccgctgtc
gaaagcaaactgccgcccgctgcggacaatgaagcatctgttgaggaggcggccggcaat
aaatcgtaa
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