Planctopirus limnophila: Plim_2783
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Entry
Plim_2783 CDS
T01225
Name
(GenBank) radical SAM enzyme, Cfr family
KO
K06941
23S rRNA (adenine2503-C2)-methyltransferase [EC:
2.1.1.192
]
Organism
plm
Planctopirus limnophila
Brite
KEGG Orthology (KO) [BR:
plm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
plm03009
]
Plim_2783
Enzymes [BR:
plm01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.192 23S rRNA (adenine2503-C2)-methyltransferase
Plim_2783
Ribosome biogenesis [BR:
plm03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Plim_2783
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
RlmN_N
Motif
Other DBs
NCBI-ProteinID:
ADG68606
UniProt:
D5SRB3
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All DBs
Position
3615142..3616368
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AA seq
408 aa
AA seq
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MFFLPAALPKSLTAKYLVILVTTFAVQESHALLARLFRLKSLSSLLLSQIDCAMLPRIYE
KSPAELVQWCQEQGLPTYRAGQIQQQIFPNRATQFGEMTNLPAKLRELLAATFTLLPSEV
VAHQIAKDRTEKLLLQLHDGSLVECVLMREDDRRTICISTQVGCGMGCVFCASGLLGLKR
NLTTGEILEQVLRLDRLLPADEKLTNVVVMGMGEPLANLKNLLPALDRLTADDGLGLGAR
RITVSTVGLPEKIRELAQTGHQFNLAVSLHAPEAELRTKLVPVNKNIGIEAVLEAADDYF
AITGRRVSYEYVLLGGINDLPEHARQLGHLLKSRIAHVNLIPMNGVKELPFAEPSAPQTG
EFVAILESFGVPVTVRKRKGADIDAACGQLRMKREQQNLVVLKAGPQP
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
ttgttttttctaccggctgctctgccaaaatccctcacagccaaataccttgttatactt
gtgacaactttcgccgttcaggagtctcacgcgctcctcgcccggctatttcgtctcaaa
tcgctctcctcgcttcttttgtctcagatcgactgtgccatgctgcctcgcatctacgaa
aaatcgcccgccgaacttgtccagtggtgccaggaacaaggtttgcccacctaccgggcc
ggccagattcagcagcagatcttccccaatcgagccacacaatttggcgagatgaccaac
cttcccgccaaactgcgcgagctcctggcagctacttttacgctcctccccagcgaagtc
gtagcccatcagatcgccaaagaccgcacggaaaaactgctcctgcagctccacgacggc
tctctcgtcgaatgcgtcctcatgcgtgaagacgaccgccgcaccatctgcatcagcacc
caggtcggctgcggcatggggtgcgtcttctgtgccagcggccttctgggcctcaagcgt
aacctcaccacaggcgagatcctcgaacaggtcctccgcctcgaccgccttctcccggct
gacgaaaaactcaccaacgtcgtcgtcatgggaatgggtgaaccgctcgccaacctcaag
aaccttctaccggctctcgatcgactcacggccgatgatggcctgggcctgggtgcgcgg
cgtatcactgtctcgacggtcggcctgcccgaaaaaatccgcgagctggcccagacgggc
caccagttcaacctcgccgtctcactccacgccccggaagccgaactccgcaccaagctc
gtcccggtcaataagaacattgggatcgaagccgtgctagaagcggcggacgactacttc
gcgatcactggccgccgggtgagttatgaatatgtccttctgggtggtattaacgatctc
cctgagcacgcgaggcaactaggccatttactcaaatcgcggattgcccacgtcaatctg
atccctatgaacggagtgaaagaactccccttcgccgaaccctccgctccccaaacgggc
gagttcgtcgctattctggaatccttcggcgtccctgtcactgtgaggaaaagaaaaggc
gccgacatcgacgccgcctgcggccaactccgcatgaaacgcgagcagcaaaacctcgtc
gtgctgaaagcaggacctcaaccgtag
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