Planctopirus limnophila: Plim_2815
Help
Entry
Plim_2815 CDS
T01225
Name
(GenBank) pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
plm
Planctopirus limnophila
Brite
KEGG Orthology (KO) [BR:
plm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
plm03009
]
Plim_2815
Enzymes [BR:
plm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
Plim_2815
Ribosome biogenesis [BR:
plm03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Plim_2815
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
ADG68637
UniProt:
D5SRE4
LinkDB
All DBs
Position
complement(3653348..3654538)
Genome browser
AA seq
396 aa
AA seq
DB search
MPRPVPSPVVMPPVVVDSSLAGQTIVATLRKLLPDQSWSAVRKVIEQRRVLVNRYACFDE
TRRLTERDRIEVLAHPAAALPDENSIELIYVDEQIVVALKPEGMVTERRYDDLPDAPELR
WRALTLDEAVTIRLMGGREATIAGRANPTSPGRPPLLPAGQRPVHRRDQMRRDSQRRDAT
GSSAKSRLHTPKAPPCHVRAAHRLDRQTSGLVVLSRVPEAGAKLYAQFQAHDVLREYEAL
VWGWIEPQRLESELIRDRGDGRRGSRQPVTMLEAGAEDSPAANPLPAGKMAATNLVASRQ
GHFKSGTGELAPVSWIRCQLETGRTHQVRIHLSEKGNPIVGDDVYGTHSLDGVPRLYLHA
ARLGFIHPMTGKRLEFSLSWPEVDRKWLESHFEDKS
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
gtgcctcgtccagttccttctcctgtggttatgcctcctgtcgtggtcgattcttcgctc
gctggccagacgattgttgccaccttgcggaaactgctccctgatcaaagctggagtgca
gtccgtaaagtgatcgagcagcggcgggtgctcgtcaatcggtacgcctgcttcgatgaa
acccgccgtctcacagaacgtgatcgaatcgaagttctcgctcatcccgcggctgcattg
cctgatgaaaactcgattgagctgatttatgtcgatgagcagatcgtagtcgcactgaag
cctgaaggaatggtcacagagcgccggtatgacgatctgccagatgctcccgagttacgc
tggcgtgcgttgacgctcgatgaagcggtcaccattcgtttgatgggagggcgggaggcc
accattgccggaagggcaaatcctacatcgccgggcaggccgccattgttacccgccggt
caacgccccgttcatcgtcgagaccagatgcgtcgtgattctcagcggcgcgatgcgaca
ggaagttctgcaaaatcgagattacacaccccgaaagccccgccgtgtcatgtgcgagca
gctcaccggctcgatcgtcagacgagtggactcgttgtcttgagtcgggttcccgaagcg
ggagcaaagctctacgctcagtttcaagcgcacgatgtgctgcgagagtacgaggctctg
gtctggggctggatagagcctcaacgactggaaagtgaactgattcgagaccggggcgat
ggtcgccgaggcagccgccagccggtaactatgctcgaagcgggggctgaagatagtccc
gcagccaatccattaccagctggaaaaatggctgcgaccaatctcgtggccagtcggcag
ggtcacttcaagtcaggaactggtgagttggcacctgtcagctggatccgctgccagctt
gagaccgggcgcacacatcaggtacgaattcatctctccgaaaaaggaaacccgattgtg
ggagacgatgtctacgggacacattctctcgatggagttccccggctctacctgcatgca
gcccggttgggatttatccatccgatgactggtaagcgactggaattcagtttgagctgg
cctgaagttgatcgcaagtggctcgaaagccactttgaagataaatcatga
DBGET
integrated database retrieval system
