Planctopirus limnophila: Plim_2882
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Entry
Plim_2882 CDS
T01225
Name
(GenBank) Tetratricopeptide TPR_2 repeat protein
Organism
plm
Planctopirus limnophila
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_14
TPR_17
TPR_2
TPR_12
TPR_1
TPR_16
TPR_CcmH_CycH
TPR_11
YHS
TPR_9
ANAPC3
ARM_TT21_5th
HAT_PRP39_N
ARM_TT21_C
TPR_MalT
TPR_21
Motif
Other DBs
NCBI-ProteinID:
ADG68704
UniProt:
D5SRY0
LinkDB
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Position
3730827..3733130
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AA seq
767 aa
AA seq
DB search
MKRIARKLALGITGLALTVSWIGCAHQGIQSPLARWRGELSPKTQTVSAAKASHGANASP
SKSNAGLLSRLTKRPTKTAKPSAKPVNDSALWLEQAAQAEIGGRLKEAQDLYAKVCQAEP
GHVLAWHRLAVVTTQLDDFPTAWSHYQEALKLAPDNADIWSDAGYCLFRQGSYEQAEKHV
REAMKQHPDESRYINNLALIRGVQGHADEALGLFKKCHDEATSLEFMAQIHELRKDPAAA
KSARDQAQVARAKKTSQTLAATTGGIPEAVSPEASASKKALDFPTEPKEAATAAASAQVS
STSSPLADPAVKAAAYLVDELPPSPSMAKPLATADSAPSSSPSLSNPPAAVAPAVVPLGH
RLAIGNQPRAMEVVPPPQVSQIATRPAVPAVAQGTISIVKSRPLSTPVESLLPIIQPAVM
PASGVLQSSTAPIVQPPAQQIPAPQLLADRIPATDPKSVASTVSETPAPLPAAVITRAAH
TQAGDEERLPARTEQRIVSESSLMTTIVSRVSPQDVTINQIHAPRTFPMDAVEVETEDPG
DAPIFVIRGQSQDAAAPSNLPVPAPAEALPERLETQPESTQTFPVKVPESVEKSSTDVSD
VAAELAAGPAPFPESSKLQPQVKQQIRAVDVEWFDSRRQQILGRQQQDLFCGYCPVALRE
ARELVDGRPEFACESDGQRILCSSAEALKLFQSDPSRYLPVKAGQDLVLSKESSSAGKPD
ELPTPTSPPASRGNLAYASWYEGKLYFFQSAAALKEFHEHPESVVLP
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcatagcacgaaaactggcgctgggaatcacagggctggcgcttaccgtctcc
tggatcggctgtgctcatcaggggatacaatctcctctggcgagatggcggggagaattg
tcgccgaagactcagaccgtttccgccgcgaaagcttcgcacggtgccaacgcttcccca
tcaaagtcgaacgcaggcctcttatctcgcctcacgaagcgtcccacgaaaactgccaaa
cccagtgccaagcccgtcaacgattccgcactctggctggagcaggcggctcaggctgaa
attggtggccgactcaaagaagcacaagacctgtatgccaaggtttgtcaggcagaaccc
ggtcatgtgctggcctggcatcgtctcgcggtcgtcaccactcaacttgatgattttccg
accgcctggagccactatcaggaagcactcaagctggctcctgacaatgcggatatctgg
agtgatgccggctattgcctgttccggcaagggagttacgagcaggccgaaaagcatgtg
cgcgaagcgatgaagcaacatcccgatgaatctcgctatatcaataacctcgctctcatt
cgcggggtgcaaggccatgcggatgaagcacttggtttgttcaaaaaatgccacgacgaa
gcgacctctctggagtttatggcccagattcatgagttgaggaaagatccagcggctgcg
aaatcggctcgtgatcaggcccaggtggctcgtgcgaaaaagacttctcaaacattggct
gcgacgacaggtgggattccagaagccgtctccccagaggcttcagccagtaagaaagct
ctggattttccgactgaacccaaagaggcagctaccgcggcagcttctgctcaggtgagc
tcaacatcatcaccattggctgatcccgcagtgaaagccgctgcctacctggtggacgaa
ttacccccttcgccttcgatggccaaacctttagcaactgcagacagtgctccctcctct
agcccatcgttgtcgaatccaccagccgcagtcgctccagcagtggttccactggggcat
cgactggcgattggtaaccagccgcgagcgatggaagttgtgcctcctcctcaagtgagt
cagatcgcgacgagacctgctgttcccgcggtagctcaggggacgatttcgattgtgaag
tcacgcccgctatcgactccggtcgagagtctgctgccgattattcaacctgcggtgatg
cccgcttcaggcgtcttgcagagttcaactgcaccaattgttcagccacctgcacagcaa
attccagcaccgcagcttctggcagatcgtataccggcaacagatccaaaatcggttgcg
tcaactgtgagcgagactccggcaccattgccagcggccgtcatcacgagagctgcacat
acccaagccggagatgaggagcgtcttcctgctcgtacagaacagcgaatcgtctcggaa
tcctcgctgatgacgacaatcgtgtcgcgagtcagtccacaggatgtgacaatcaatcag
attcatgctccgcgcacgttcccgatggatgcggtcgaggtcgaaacggaagatcctggg
gatgcacccatttttgtcattcgcgggcaaagccaggacgctgcagcaccttcgaatctt
cccgtgccagccccagcggaagcattgccagagcggttagagacacagccagaatcgacc
cagacttttcctgtcaaagtgcccgagagcgtggaaaagagttctaccgatgtgagtgat
gttgcagcagagctggctgcagggccagcccctttcccggagtcatccaagcttcagcca
caagtaaaacagcagattcgtgctgtggatgtcgagtggtttgattcgcgtcgtcagcag
attttagggcgtcagcagcaggatctgttctgtggctactgcccggtggccttgcgggag
gcacgcgagctggtggatggccgaccggagtttgcctgcgaaagcgatggacagcgaatt
ctgtgcagcagtgccgaggcgttaaagctcttccagagcgatccttcgagatatctgccg
gtcaaagcggggcaggatctggtactctcgaaggaaagttcttcagccggcaaacccgat
gaattgccaaccccaacgagcccgcctgcaagccgcgggaacctggcttatgccagttgg
tacgagggaaagctctatttctttcagtcagccgccgcgctgaaagagtttcacgagcat
cctgaaagcgtcgttctcccgtaa
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