Planctopirus limnophila: Plim_3111
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Entry
Plim_3111 CDS
T01225
Name
(GenBank) helix-turn-helix-domain containing protein AraC type
KO
K07506
AraC family transcriptional regulator
Organism
plm
Planctopirus limnophila
Brite
KEGG Orthology (KO) [BR:
plm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
plm03000
]
Plim_3111
Transcription factors [BR:
plm03000
]
Prokaryotic type
Helix-turn-helix
AraC family
Plim_3111
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
TetR_N
HTH_3
RHH_1
UPF0122
Sigma70_r4
DUF7317
HTH_31
Rrf2
HTH_7
HTH_6
LacI
Motif
Other DBs
NCBI-ProteinID:
ADG68926
UniProt:
D5SSX5
LinkDB
All DBs
Position
4028016..4028960
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AA seq
314 aa
AA seq
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MNQSPSPTPASSGPNQQPFSSHFMSKYVQPAVSDRDFRNVEYRLHNRRSVALYRCSRDFA
TPSTPKPDFMLRLHLNKFPAQHEVNYGGGWLKRMPDSYVLAPPNVDSRVRGNLQNHFTSL
ILVFPETELRQVAGELLDAEGKHLWQPPSKELHDTSISTLMRQLWESSCSSAPAESVLIE
GTFISLVGRLLLSGQQKRLAIPKYESSASLITSKALNYMQDRLSEKLTLEEIAKAAGVSR
SYLIRVFAQATGKSVHARLIELRIERAKQLLIQYGRNMTLDQVALACGFWDGTHLTRSFF
EHVGITPQQFRENS
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagtctccctcgccaacacctgccagcagcggtccgaatcagcagccgttttcc
tcgcatttcatgtcgaaatacgttcagccggcggtctctgatcgtgacttcagaaatgtc
gaataccgcctccataaccgcagatctgtggccctctatcgctgctctcgggatttcgcc
acaccttcgactcccaagcccgatttcatgctcaggctgcatctcaataagttccccgca
cagcatgaggtcaactacggcggtggctggctgaaacgcatgcccgattcctatgttctc
gcaccaccaaacgtcgattcccgtgttcgcgggaacctccagaaccatttcaccagcctc
attctggtcttccccgaaacagaactccggcaagtcgccggggagcttcttgacgctgag
ggtaaacacctatggcaaccaccatcgaaagaactccacgatacatcgatctcaacgttg
atgaggcaactgtgggagtcttcctgcagttcggcaccggccgaatctgtgttgatcgag
gggacatttatttctcttgtgggtcgcctgttactctccggacagcagaaacgactggcc
attcccaaatatgaaagcagtgcttcgctcatcaccagcaaagctctgaactacatgcag
gatcgtctcagcgaaaaactgacgctggaagagattgccaaggctgccggggtcagccgc
tcgtacctcattcgcgtcttcgctcaagcgacaggtaaaagtgtgcacgcccgcctgatt
gaacttcgtatcgagcgagccaaacagctcctgattcagtatggccgcaatatgactctc
gaccaggtggctttagcctgcggattctgggatggcacgcatctgactcgctcatttttt
gagcatgtaggcattactccccagcagttccgcgagaactcgtga
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