Planctopirus limnophila: Plim_3191
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Entry
Plim_3191 CDS
T01225
Name
(GenBank) tryptophan synthase, beta subunit
KO
K01696
tryptophan synthase beta chain [EC:
4.2.1.20
]
Organism
plm
Planctopirus limnophila
Pathway
plm00260
Glycine, serine and threonine metabolism
plm00400
Phenylalanine, tyrosine and tryptophan biosynthesis
plm01100
Metabolic pathways
plm01110
Biosynthesis of secondary metabolites
plm01230
Biosynthesis of amino acids
Module
plm_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
plm00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Plim_3191
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
Plim_3191
Enzymes [BR:
plm01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
Plim_3191
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Gene cluster
GFIT
Motif
Pfam:
PALP
Motif
Other DBs
NCBI-ProteinID:
ADG69005
UniProt:
D5STH6
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All DBs
Position
complement(4126487..4127704)
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AA seq
405 aa
AA seq
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MSAAITHPISQVPDAQGRFGEFGRRFVPETLMYALEELAQAYESAKKDPEFAATLEGLLK
HFVGRPNPLYFAERLTRMSGGAKIYFKREDLNHTGAHKINNALGQALLTMRMGKTRIIAE
TGAGQHGVATATACAHFGIPCTVFMGEEDVRRQKLNVFIMRTMGAEVRPVTSGSRTLRDA
INEAMRDWMSSVKNTHYIIGSVVGPHPFPMIVRDFQSVIGREARAQCFEMIGGLPTEIVA
CVGGGSNAAGMFYPFVDDESVRITGVEAGGRSPKPGDHASALSFGNKGILHGSYSYVLQD
EDGQTSDVHSVSAGLDYPGVGPEHAYWKDSGRVQYTSCSDDEALAAMQLMARTEGILPAL
ETSHAISYTLKRASEMSPDESIVVCLSGRGDKDLNEVARLTGQQI
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcagccatcactcatccgatctctcaggttcccgatgcccaggggcgttttggg
gagttcgggagacgatttgtccctgagaccttgatgtacgccctggaagaactggctcag
gcgtacgagagtgcgaaaaaagaccccgagtttgctgcaacactcgaaggcttactcaag
cactttgtgggccggcctaacccgctctacttcgcagaacgacttacccgcatgagcggt
ggtgcgaagatttatttcaagcgggaagatctcaaccatacgggtgcccataagatcaac
aatgctctcgggcaggctctcctgacgatgcggatgggcaagacccgcatcattgctgaa
acaggtgccggccagcacggtgtcgccaccgccaccgcctgcgctcacttcggtattccc
tgtacggtctttatgggcgaagaagatgttcgccgacagaagctgaacgtcttcatcatg
cgaacgatgggagccgaagttcgacctgtgacatcgggttcgcgaactttacgcgatgcc
attaacgaagcgatgcgtgactggatgtcttcggtcaagaatacgcattacatcattggt
tcggtggttgggccgcacccctttccgatgatcgttcgcgatttccaatcggtgattggc
cgggaagcccgtgctcaatgctttgagatgatcggtggattgccgacagagatcgtggcc
tgtgtgggtggcggctcgaatgctgccggcatgttttatccctttgttgacgatgaatcg
gtgcgaattactggcgttgaagcgggtggccgcagccctaagcccggcgatcatgccagt
gccctctcgtttggaaacaaagggattctgcatggcagctacagctacgttttgcaggat
gaagatggccagacctccgatgtccattcggtatcggccgggctcgattatcccggtgtc
ggccccgaacatgcctactggaaagattccggccgcgtgcagtacaccagttgcagcgat
gacgaggctctggcggccatgcaactgatggcacgaacagagggcattcttcctgcactc
gaaacatctcacgccatctcttacacactcaagcgtgccagtgaaatgtcgccggatgaa
tccatcgtcgtctgcctttcgggccgtggcgataaagacctcaatgaagtcgcacggctg
accggccagcagatttaa
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