Planctopirus limnophila: Plim_3302
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Entry
Plim_3302 CDS
T01225
Name
(GenBank) aspartyl-tRNA synthetase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
plm
Planctopirus limnophila
Pathway
plm00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
plm00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Plim_3302
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
plm01007
]
Plim_3302
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
plm03016
]
Plim_3302
03029 Mitochondrial biogenesis [BR:
plm03029
]
Plim_3302
Enzymes [BR:
plm01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
Plim_3302
Amino acid related enzymes [BR:
plm01007
]
Aminoacyl-tRNA synthetase
Class II (A)
Plim_3302
Transfer RNA biogenesis [BR:
plm03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
Plim_3302
Prokaryotic type
Other AARSs
Plim_3302
Mitochondrial biogenesis [BR:
plm03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
Plim_3302
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
ADG69115
UniProt:
D5SU62
LinkDB
All DBs
Position
complement(4262199..4263968)
Genome browser
AA seq
589 aa
AA seq
DB search
MYRTKTCGELRIEHVGQVATLCGWVDSYRDHKGVVFIDLRDRYGITQVVFQADTPTDMQT
IARGLRSEDVIQVTGEVLARGAGLENPKLVTGQVEVRGRELTLLNKSKTPPFEPRTQDLP
NEELRMQYRYLDLRRPVVQQAIILRHKLAKATRDYFDRHNFLEIETPILGRSTPEGARDY
LVPSRVHEGSFYALPQSPQLYKQILMVAGYDRYFQIARCFRDEDLRADRQPEFTQIDVEM
AFVKQDDILSTIDGLMAHLLKELRGEELPLPLPRLTHREVMEKYGSDKPDLRFGMELICL
KEIAENCGFSVFKNTIANGNRVRGIVAPGAAEKYSRKQIDELTEFVKQYGAQGLAFFRVK
EEGLDSPIAKFFSAEDQQKLIAKLGARAGDLIFCVADTAKVSSAALGALRNRLAKELALY
DPKEMKIAWVVDFPMFQWDEDEQRWVAEHHPFCQPHEEDIDILETDPGKVRAQSYDLVCN
GYEAASGSVRIHDPAVQQRIFSMMGIQPEEAELRFGFLLEALRYGAPPHAGVALGLDRWS
MMFSGTDNIRDVIAFPKNQKASDLLTGAPAPVDTKQLRDLRIKVDVPVK
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
gtgtaccggaccaagacctgcggcgaactgcgtatcgagcatgttggacaagttgccacc
ctttgtggctgggtggacagctaccgcgatcacaagggggttgtcttcatcgacctgcgt
gaccgttacggcatcactcaagttgtctttcaggccgacactcccactgacatgcagacc
atcgcccgtggccttcgcagtgaagatgtcatccaggtgacaggcgaagtcctcgctcgt
ggtgccggtctcgaaaaccccaagctcgtcacggggcaggtggaagtccgcggccgcgag
ttgacgctgctcaacaagagtaagacgcctcctttcgagccgcgcacgcaggatcttccc
aacgaagaactgcggatgcagtaccgctatctcgacctgcggcggcccgtggtgcagcag
gcaattattctgcggcataagctcgctaaagcgacgcgcgattacttcgaccgtcacaac
ttcctcgaaatcgaaacgcccattctgggtcgttcgacacctgaaggggcgcgggattac
ctcgttcccagccgggtgcacgaggggagcttttatgcgctgccgcaatcgccgcagctc
tacaagcagattctgatggtcgccggctacgaccgttacttccagattgcccgctgcttc
cgcgatgaagacctgcgggctgatcgccagcccgagttcacccagatcgacgtggaaatg
gccttcgtcaagcaggacgacatcctttcgaccatcgacggcctcatggcgcacctgctc
aaggagctgcgcggcgaggaactgccgctgccactcccaaggctcacgcaccgcgaagtc
atggagaagtacggctccgacaagcctgacctgcggtttggtatggaactgatctgcctc
aaggagatcgctgaaaactgcggcttcagtgtcttcaagaacaccatcgccaacggcaac
cgcgtgcgggggattgttgctcccggtgctgccgagaaatacagccgcaagcagattgat
gaactgacggaattcgtgaagcaatacggggcgcagggcctcgccttcttccgcgtgaag
gaggaaggtctcgattcgccgattgccaagttcttctcggcggaggatcagcagaagctg
atcgccaagctgggcgccagggctggcgacctgatcttctgcgtggccgacactgccaag
gtttcctcggcggctctgggtgcactgcgcaaccggctggcgaaggaactggccctttac
gatccgaaggaaatgaagatcgcctgggtcgtcgatttccccatgttccagtgggatgaa
gacgagcagcggtgggtggctgagcaccatcccttctgccagccgcacgaagaggatatc
gacattctggaaaccgacccgggcaaggtgcgggctcagtcgtacgacctggtctgcaac
ggttatgaggcagccagtggcagcgtccgtattcatgatcccgcggtccagcagcgcatt
ttcagcatgatggggatccagccggaagaagccgaactccgctttggcttcctgctggaa
gcattgcgatatggcgcacctcctcatgccggtgtggcgctgggtctggatcgctggtcg
atgatgttctcgggcacggacaacatccgcgacgtcatcgccttcccgaagaaccagaag
gccagcgacctcctcaccggcgccccggctcccgtcgacaccaaacaactccgcgacctg
cggatcaaggtggatgtgccggtgaagtag
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