Planctopirus limnophila: Plim_3342
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Entry
Plim_3342 CDS
T01225
Name
(GenBank) DNA repair exonuclease-like protein
KO
K03547
DNA repair protein SbcD/Mre11
Organism
plm
Planctopirus limnophila
Brite
KEGG Orthology (KO) [BR:
plm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plm03400
]
Plim_3342
DNA repair and recombination proteins [BR:
plm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Plim_3342
Archaeal homologous recombinant proteins
Plim_3342
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Metallophos
DUF8708
Motif
Other DBs
NCBI-ProteinID:
ADG69155
UniProt:
D5SUA2
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All DBs
Position
complement(4325200..4326528)
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AA seq
442 aa
AA seq
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MTQFRPMRFLHAAGLMLERPLLETGELAGDLAKTAAHATLFAWERLVDLAIAKDVDFVLL
TGDTFDFREASLAAEVAFRQGAQRLDAKEIPLIIAPGQLDTASGWAAIPALPENVTLFEH
AEDPAIDLTVGGQTYCAIVPITDSTSVDPPELERLRARVPKKGQVNPFVVGVVCHRLPSQ
SMAEAGATHAARRYVSVHYLAHGGRQSPELLPITEGLVHSPPLPVPFRRRDLTTGATLVD
VDSTGRIQLTNQPLSPVRRFQFTMDISPLKSRSQLVEKMFAIVQEQQPLPHESLRLAHWS
FVGTSDVLQDLASDAAIANLLRHLTDWTDQLETGKWRHTCLPRYGSHWYWLNQENSLEAN
AREVLDRIEPKDDDTWQTWMLDHLPEQDDFFAGLLASVGPLDEERIAGQARQLCHEWLSD
LADLTAAGSSSADGQTSGDVTP
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgacacagttcaggcccatgcggtttctgcatgccgccggcttgatgctggagcggcca
cttctcgaaacgggcgaactggccggagatctggcaaagacggccgcccatgccacgctc
tttgcctgggagcgactggtcgatctggccattgccaaagatgtcgatttcgtcctcctc
acgggtgacaccttcgacttccgtgaggcctcactcgctgccgaagttgcttttcgacag
ggcgcccagcgattagacgccaaagagatccctctcattatcgctcccggccagctcgat
acagccagcggctgggccgcgatccccgcacttccggaaaacgtcacactcttcgaacat
gccgaagacccggccattgatctgactgtcggcggacagacttactgtgccatcgtgccc
attacagattccaccagtgtcgatccgcctgaacttgaacgcttgcgcgcccgtgtgccg
aaaaaagggcaggtgaatccttttgtcgtcggggttgtctgtcatcgtctccccagccag
agtatggcggaagccggggccacgcatgcggctcgtcgatatgtatcggttcattatctc
gcgcatggtggccgccagtcccccgagttgttgccgattaccgaagggctcgtgcactcc
ccgccattaccagttccgtttcgacggcgcgacctcaccacaggtgccactctggtcgat
gtcgattcgacaggtcgcattcaactcacgaatcaaccactttctcctgtgcgtcgattc
cagttcacgatggatatcagcccactgaagtcacggtcacagcttgtcgaaaaaatgttc
gccattgtgcaggagcagcagcctttaccgcacgaatctctgcggctggctcactggtca
tttgtggggaccagcgacgtgctgcaggatctcgccagtgatgcggccattgccaattta
ttgcgacatctcaccgactggactgatcagctcgagaccggcaagtggcgacacacctgt
ctcccacgttatggcagtcactggtactggctgaatcaggagaactcgctcgaagccaat
gcccgggaagtgctcgatcgaattgaacctaaagatgatgacacctggcagacctggatg
ctcgatcatctcccggaacaggatgactttttcgctggccttctggccagtgttggcccc
ctcgacgaagaacgaattgccggtcaggctcgacaactctgtcatgaatggctcagtgac
cttgccgatctgactgctgctggaagctcttctgcggacggacaaacgtcgggagatgta
accccgtga
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