Planctopirus limnophila: Plim_3675
Help
Entry
Plim_3675 CDS
T01225
Name
(GenBank) beta-lactamase domain protein
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
plm
Planctopirus limnophila
Brite
KEGG Orthology (KO) [BR:
plm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
plm03016
]
Plim_3675
Enzymes [BR:
plm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
Plim_3675
Transfer RNA biogenesis [BR:
plm03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
Plim_3675
Prokaryotic type
Plim_3675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Motif
Other DBs
NCBI-ProteinID:
ADG69487
UniProt:
D5SVX7
LinkDB
All DBs
Position
complement(4727248..4728255)
Genome browser
AA seq
335 aa
AA seq
DB search
MPESLARFHAELILVNGSTGDPVLLIDYPDRDDAVLLDAGENGALSLEQLADLSVVLITH
HHIDHFVGLDRIIRANMDRDKTLRIYGPPKTIEKVADRIRSYEFQFFPFQKIVIDVYEIH
EDGFRVGRLDCGRKFPPPEIRDEARTGCVIFENETIQVEAVFAEHTVPCLSYAVIEKPGW
FLNVDALRKSLLKPGSWIGDVLGLLREDAPNGTQVLIEGGSYPLATLRDKFFLKSLGARL
AFVTDTLWNEASRSRLLSIAQRASVLYCDSFYAQGQLSQALKYHHMTASQAGELARLAKA
EKLVLIHFAKRYAGKYDILVDEAREHFAKVTAQIP
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgagtcgctagcgagatttcatgccgaattgatcttggtgaatggatcaacagga
gatcctgtcctgctgatcgattatccggatcgggatgatgcagttctgctggatgcggga
gagaatggtgctctctcgttggaacagttggcggatctttccgtggtgctgattacgcat
catcatatcgatcattttgtgggtctggatcgcattatccgtgcgaatatggatcgagac
aaaacgttaaggatctatggcccgccgaagactattgagaaggtggcggatcgcattcgc
agctatgaatttcaattctttccgtttcagaagatcgtcattgatgtttatgagattcat
gaagatggctttcgtgtgggacgtctcgactgtggtcgaaagtttccaccgccggagatt
cgtgatgaggcgcgaacgggatgtgtgattttcgagaatgagacgattcaggtggaggcc
gtctttgccgagcatacggtgccgtgtttgagttacgctgtgattgagaagccgggttgg
tttttgaatgtcgatgcactgcggaaaagtttgttaaagccggggagttggataggggat
gtcctgggccttttgcgtgaggatgctccgaatggaactcaagttctgattgaaggtggg
agttatccgctggcgactttgcgggataagttctttctgaaaagcctgggggcccgactc
gcttttgtgacagatacgctctggaatgaagcttctcgatcgaggttactttcgattgca
cagcgggccagtgtcctttattgcgattcgttctacgcccaggggcagttatcgcaggca
ctgaagtatcaccatatgacggcttctcaggcaggtgaattggcacgcctggcaaaagcc
gagaaactggtgctgatccattttgccaaacgctatgccggcaagtacgacattctggtt
gatgaagcgcgcgaacattttgccaaggtgacggctcagatcccttga
DBGET
integrated database retrieval system
