Planctopirus limnophila: Plim_4057
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Entry
Plim_4057 CDS
T01225
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
plm
Planctopirus limnophila
Pathway
plm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
plm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Plim_4057
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plm03400
]
Plim_4057
DNA repair and recombination proteins [BR:
plm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
Plim_4057
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_27
AAA_29
Motif
Other DBs
NCBI-ProteinID:
ADG69868
UniProt:
D5SY75
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Position
5210762..5213437
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AA seq
891 aa
AA seq
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MPADPPFPVDRAGLTPMMQRYLEVKDQHPAAILFFRMGDFYELFYEDAKVAARILGLTLT
SRDKNSENPVPMAGFPYHALTGYLQKMIRAGHRVAICEQVEDPKAAKGMVKREVTQIVTP
GTLTDDSLLDPRETNLLAAILPGKSHSGLAWLELSTGRFICATLPASQIHDELARLQPAE
VLTPERSREDLTIARIRLGAWAVTERPPWAYRPEEAHRLLLDQFGVATLEGFGFSGNSSS
TTQATIEPGIIAAGALLEYVRETQKSQLIHLSRLEPYEPSQHLLIDESTRRSLELTRTLR
SNQREGSLLWAIDQTVTPMGARLLLEWLSNPLKERTAIEARLNAVSELVVDLRTTQSLQE
ILKTGYDIQRLTARIGTGRATPRDLVSLTRTLSLLPQIKARLAGRRSTLLNELEAKIDLH
QDLREAIEAALVDEPPLNLTEGGAIRPGFDPQLDEWRDLARGGKEWMAAYQAEEVRRTGI
ANLKVGFNRVFGFYLECSASQADKVPPEYIRKQTLKNYERYITPALKEYEDKVLQAESRS
IALEQQLFSDLRQKVSSRAAELRVTAESLAVLDVLCSFAILATRRQYVRPEIASEPVLEI
RQGRHPVLDQLLPTGGFVPNDIRLGGSNGLIQLITGPNMAGKSTYIRQAALLTILTQIGS
FVPAESARIGLADRIFARVGASDELGRGQSTFMVEMTETARILHSATASSLVILDEIGRG
TSTYDGISLAWAITEFLHDAVGCRTFFATHYHELTQLSASLKSVMNWNVAVREHNDDVVF
MHQIVPGAADKSYGIHVGRLAGLPGVVLDRAREILKVLEAEQTDHLSQDPGKSRLPARKT
RRSREQQLTLFELAEHPILEKIRQLDVHGMSPEAAWQELARLRSELSADKG
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
ttgcccgccgatcctccgttcccggtggatcgcgcggggctgacgccgatgatgcagcgg
tatctcgaggtcaaagaccagcatcctgcggctattctgttctttcggatgggcgacttt
tacgaactcttttacgaggacgcgaaagtcgctgcccgcattctggggctgacactcacc
agccgcgataagaactcggaaaacccagtcccgatggcaggttttccgtaccatgctctc
acgggttatctgcagaagatgatccgtgcgggacaccgcgtcgccatctgtgagcaggtc
gaagatcccaaagcggccaaggggatggtcaaacgggaagtgacacaaatcgtcactccc
ggcacactcaccgacgactcgctgctcgacccgcgtgaaaccaatctgctggccgccatc
cttcccggaaaaagccacagtggcctggcctggctcgaactttccacgggccggttcatc
tgtgccacacttcctgcgagtcagatacatgatgaactcgcgcgactgcagccagccgaa
gttctgacgcccgaacgatcgcgtgaagatctgacgattgcccgcattcgcctgggtgcc
tgggctgtgaccgaacgtccgccctgggcctacaggcctgaagaggctcaccgcctgctc
cttgatcaatttggtgtggccaccctcgaaggctttggtttttccggcaacagttcatcg
accacacaggccaccatcgagcccgggatcattgccgccggggctttgctcgaatacgtg
cgggaaactcagaagtcgcaactcattcatctttcccggctggagccttacgagccatcg
cagcatctgttgattgatgaatcgacacgccgcagcctcgaactgacgcggacattgaga
tccaatcagcgggaagggagtctcctgtgggccatcgatcaaacggtcacacccatgggt
gcccggctgctcctcgaatggctctcgaatccactcaaagagcgcactgccatcgaagcc
cggctgaacgctgtgagtgaactggtggttgacctgcggacgacacaatcgctgcaggag
atcctcaaaacgggttacgacatccagcggcttacagcccgcatcgggacaggccgtgcc
acgccgcgcgatctggtcagcctgacgcgcacgctcagtcttttgccgcagatcaaggcc
cgtctggctggccgacgatcgaccctgctgaatgaactcgaagcgaagatcgatctccat
caggacttgcgagaagccatcgaagcggcactggtcgatgaaccgcccctcaatctgacg
gaaggtggtgccattcggcccggctttgatcctcaacttgacgaatggcgcgatctggcg
cgtggtggtaaagaatggatggcagcctatcaagccgaagaggtccgccggacagggatc
gcgaatctgaaagtgggctttaaccgcgtttttggtttctatttagaatgtagtgccagc
caggcagataaagttcctcccgagtatatccgtaaacaaactctaaagaactacgaacgc
tatatcacccccgctttaaaagagtatgaagataaagttctgcaggccgaaagccggtcg
attgctctcgaacagcaactcttcagtgacttgcggcaaaaggtcagctctcgcgctgca
gaattgcgagtaacggcagaatcattggctgtgctcgatgttctctgcagttttgccata
ctcgccacgcggcggcagtatgtccgcccggagatcgcgagtgaaccagtgctggagata
cgacaggggcgtcacccggttcttgatcaacttttgccgacaggtggatttgtcccgaat
gatattcgcctgggtggctcgaatggtttgatccaactcattaccggccccaatatggca
ggtaagagtacatatatccgtcaggcagctttattaacaatcctcacacagattggttcg
tttgtcccggcagaatccgcccggattggtctggcggatcggatttttgcccgtgtcggt
gccagcgatgaactgggccgggggcaatcgacattcatggtcgagatgactgagacagcc
cggattctgcattcggccaccgcatcgagcctcgtgattctcgacgagattggccgtggc
accagtacttatgacgggatttcgctggcctgggccattaccgagttcctgcatgatgcc
gtcggctgccggacgttctttgcgacgcattaccacgaattgacccaactgagtgcttca
ctaaagtcggtgatgaactggaacgtggcagttcgcgaacataatgacgatgtggttttc
atgcatcagatcgtgcctggggcggctgataaaagttatggcattcatgtaggtcggctc
gccggcctgccgggtgtggtgctcgaccgtgcgcgtgaaattctgaaagtgctggaagcc
gagcagacggatcatctctcgcaggatccggggaaatcgcgactgccagcgagaaaaacc
cgccgctcacgcgagcagcaactcacactctttgaactggctgaacacccgattttagaa
aagatccgccagctcgatgtgcatggaatgagtcccgaagccgcctggcaggaactcgcc
cgcctgcgcagtgagctttcagcggataaaggatga
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