Planctopirus limnophila: Plim_4167
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Entry
Plim_4167 CDS
T01225
Name
(GenBank) polysaccharide biosynthesis protein CapD
Organism
plm
Planctopirus limnophila
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Ortholog
Paralog
GFIT
Motif
Pfam:
Polysacc_synt_2
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
NmrA
NAD_binding_10
NAD_binding_4
KR
adh_short
Motif
Other DBs
NCBI-ProteinID:
ADG69977
UniProt:
D5SZ76
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Position
5332385..5334271
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AA seq
628 aa
AA seq
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MPFRQLIIPPIYIILYGFTYLLAYSLRFDFEVPSEVWGRFLATFPLVIATKSLVNLLTRQ
WRRKHRYTSLVDVIYVTGDAFFAATLLLAINAFLPSGIVIPRSIVLIDLMLTVLAIAGLR
SMIRSYCEVIHPKLHRRLGGMSQLTPRRALIYGADASAVAIFRALKSGNEEYRICGFIDP
EGFSQSSIIGEAEVFSGQIDLAKIAKKVRAEMLLIPASTPGRIVRELLVQCDDQHLLAHV
IPGVDEIVNGRIRLATREVTISDLLRREPTKLDFESMRSYISRRRVLVTGAAGSIGSELC
RQILALNPESLILLDQSEPGIFAMEQEFQTRTTGGTRLVYEIADMRDQPTLEQIFDTYKP
QLVFHAAAYKHVPLMEANPQEAIRNNIFGTKALVDAADQFGVDRFVLISTDKAVRPTNIM
GSTKLFAEKYLQATAQKSKTEFMTVRFGNVLNSAGSVVPTFRRQILEGGPITVTHPEMVR
FFMTIPEAVQLVLQAGAIGQTGGVMILDMGDPVKILDLARDMIYLSGLKYPDDIDIVFTG
LRPGEKLYEELFYESEVSAEKIHEKIFMAHRAPISPRLVKEALARLQSAVELSREAAAAT
LREITAEFVAIDEGTSSEHISQPTRKAA
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgccatttcgacaactgatcattccaccgatctacattatcctgtacggattcacatat
cttctggcctactctctgcgcttcgatttcgaagttcccagtgaggtctgggggagattt
ctagccacttttccactggtgattgccaccaagtcgctggtgaatctattgactcgtcaa
tggcgcaggaagcaccgttacacctcgctggttgatgtcatctacgtcaccggagatgcc
ttttttgcagcgacattacttttggccatcaatgcctttctgccctcgggaatcgtgatt
ccgcgatcgattgtgttgatcgatctgatgctcacagttctggcaattgccggcctgcgt
tcgatgattcgcagctattgtgaggtgattcatcctaagctccaccgcaggctgggtggt
atgtcgcaactgactccacgccgggctttgatctacggtgcagatgccagtgcagtggca
attttccgcgcactcaaaagcggcaacgaagagtatcgcatctgtggttttatcgatcct
gaaggtttctctcagtcgagcattattggcgaagccgaagtcttcagtggccagatcgat
cttgcaaaaatcgctaaaaaagtccgagcggaaatgttgctcataccggcatcgacgccc
gggcgaatcgtgcgagagttactcgtgcaatgtgatgaccaacatcttctggcccatgtg
atcccgggtgtcgatgaaatcgtcaatggacgcattcggctggcgacgcgggaagtgacc
atctccgacctgttacgccgcgaaccgacaaagctcgattttgaaagtatgcggagttac
atctctcgtcgccgtgtgctggtcacgggagctgcgggaagtattggctcagagctgtgc
cgacaaattctggctctgaatccggaaagtctgattctgctcgatcaatccgagcctggc
atttttgccatggaacaggagttccagacgcgtacgacgggtggcactcgactggtttac
gagatcgccgatatgcgcgatcaacccacgctcgaacagatcttcgatacctacaagccc
caactggttttccatgcagcggcatataagcatgttcctcttatggaagccaatccgcag
gaagcgatccgtaacaacatcttcggtacaaaggcactggtcgatgctgctgatcaattt
ggcgtggatcgctttgtgttgatttcgaccgataaagctgtgcgtcccaccaacatcatg
ggctctacaaaactctttgccgagaaatatctgcaggcgactgcccagaaatccaaaacc
gaattcatgacggttcgcttcgggaatgtgctcaactcggctggcagtgtggtaccgaca
ttccgccgacagattctcgaaggtggcccgatcactgtcacgcatcccgagatggtgcgg
ttcttcatgacgattcctgaagccgttcaactcgtgctgcaggcaggggccatcggacaa
accggcggcgtcatgattctggatatgggcgacccggtgaaaattctcgatctggcccgc
gatatgatctatctttccgggctcaagtacccggacgatatcgacattgtctttactggt
cttagacccggcgaaaagctctacgaagaactcttctatgaatccgaagtctcggccgag
aagatccacgaaaagattttcatggcccaccgggctccgatttcacctcgtctggtgaag
gaagctctcgctcgtctgcagtcagccgtcgaactttcccgggaagctgccgctgcgact
ttgcgtgagatcacggctgagttcgtggcaattgatgaggggacatcttccgagcacatc
agccagcccactcgcaaagcggcttaa
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