Planctopirus limnophila: Plim_4193
Help
Entry
Plim_4193 CDS
T01225
Name
(GenBank) 2-dehydro-3-deoxyphosphooctonate aldolase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
plm
Planctopirus limnophila
Pathway
plm00541
Biosynthesis of various nucleotide sugars
plm01100
Metabolic pathways
plm01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
plm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
Plim_4193
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
plm01005
]
Plim_4193
Enzymes [BR:
plm01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
Plim_4193
Lipopolysaccharide biosynthesis proteins [BR:
plm01005
]
Lipid A
Plim_4193
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
ADG70001
UniProt:
D5SZA0
LinkDB
All DBs
Position
5362175..5363032
Genome browser
AA seq
285 aa
AA seq
DB search
MLPSLDNPIEIGSYRCGKGQPLLFVIGPCVIESHDLITKVSGELAELAAKKNLQIVFKSS
FDKANRTSGDSFRGPGMERGLEILARAREATGLPITTDLHEPSQAEPVAKVCDILQIPAF
LARQTDLVEASAQAAAKFGRVINVKKPQFVAPEDMVHAVKKCKSVGCHKVILTDRGTMFG
YGRLVNDFRCVPVMHGFGVPVMFDATHSVQMPGGSTTGGNRALVPFLARAAVACGVDAVF
LETHPDPDRALSDGPNQVALADLPGVIHQLVRLRELTLELTADER
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgttgccaagtcttgataacccgatcgaaatcggctcttaccgctgtggaaagggacaa
ccactgctgtttgtaatcggcccttgtgtgattgaatcacatgatttgattacgaaagtt
tctggtgaactggccgaactggccgctaagaagaatctgcagattgtcttcaaatcgagc
ttcgataaagcgaatcgcaccagtggcgatagttttcgcgggccagggatggagcgaggg
ctcgaaattctggccagagcccgcgaagccacaggtttgccgattacaaccgatctgcat
gagccgtctcaggccgaacctgtcgccaaggtgtgtgatattctgcagatccccgctttt
ctggcccggcagactgatctggtcgaagcctctgctcaggcggccgccaagtttggccgg
gtgatcaacgttaaaaagcctcagttcgtggcacccgaagatatggtgcatgcagtcaaa
aagtgcaaatcggtcggttgccacaaagtgattctgacagatcgcggcacgatgttcggc
tacggacggctggtcaacgattttcgctgtgtgccggtcatgcacggctttggtgtcccg
gtgatgttcgacgccacgcacagtgtgcagatgccagggggaagtacgactggtggcaat
cgcgcgctggttcctttcctggcgcgagctgctgtggcctgtggggttgatgccgttttc
cttgaaacgcatcctgatcctgatcgcgccttaagtgatgggcccaatcaggtggctctc
gccgatctgccgggggtcatccatcaactcgtgcgattgcgtgagctgactctggagttg
actgctgacgaacgatga
DBGET
integrated database retrieval system
