Planctopirus limnophila: Plim_4204
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Entry
Plim_4204 CDS
T01225
Name
(GenBank) threonyl-tRNA synthetase
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
plm
Planctopirus limnophila
Pathway
plm00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
plm00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Plim_4204
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
plm01007
]
Plim_4204
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
plm03016
]
Plim_4204
Enzymes [BR:
plm01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
Plim_4204
Amino acid related enzymes [BR:
plm01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
Plim_4204
Transfer RNA biogenesis [BR:
plm03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Plim_4204
Prokaryotic type
Plim_4204
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
tRNA_SAD
TGS
Motif
Other DBs
NCBI-ProteinID:
ADG70012
UniProt:
D5SZB1
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All DBs
Position
complement(5374620..5376830)
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AA seq
736 aa
AA seq
DB search
MIASGSAPSVVQIQLPDGSVKEFPGDVTPLAIAESISPRLAQAAIAARVGEKVTDLKRPV
SETTDVQPVPVQILTEKDAASLGVLRHSCAHLMARAIMRVFPGVQLAFGPVKDQGYYYDL
DLPHKLSEDDFARIEAEMQKLVEMAEPFERFITNRDEALAMLEGMGQKLKCEHIQIGLAS
EATVSFYRQGEFVDLCRGPHIPDAGRIKAFRLLSVAGAYWKGDASGQQLQRVYGTAWFSQ
KDLDAHLEQVNEAKRRDHRVLGKQLNLFSISPEVGAGLCLWLPKGATVRALLEEFIKGEL
LKRGYQPVYTPHIGRVELYETSGHFPYYRDSQFTPLYGHDGGQLIDFWIRKLQDNAISEA
DEKSLLASAKILGVEIPEYAAASGNPAKIEVLRTWEKQQERYLLKPMNCPHHAQIYKSMQ
RSYRDLPVRLAEFGTVYRHEQSGELNGMLRVRGLTQDDAHLFCTPEQVEEEFRATLQLVQ
FVLASVGLEDYRVQLSLRDPKSDKYVGSEENWQRAEASLRGVLTELNLPFTAREGEAAFY
GPKADFMVKDCIGREWQLGTVQLDYNLPERFQLEYVGADNQAHRPVMIHRAPFGSMERFT
GMLIEHFAGAFPLWLAPEQVRVLSISDKFEGYAREVEREFRAAGFRVTTDLRGAKINGKI
RDAQIELIPYMLVVGGKDQENRTVSIRDRIEGDLGAVPLAEAITRLQQEVTEKRIRSIAK
PAPAPATSNEGENYAD
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgattgcttcaggttctgccccctctgttgtccaaattcagttgcccgatggatcggtc
aaagaattcccgggtgatgtcactccgctggcgattgccgaatcgatcagccctcgattg
gcgcaagccgccattgccgcccgcgtgggcgagaaggtcaccgacctcaagcggcccgtg
agtgaaaccacagacgttcaacctgttcccgtgcagatcctcaccgagaaggacgccgcg
tcgctgggcgtgctgcggcattcgtgcgcccatctcatggcgcgggccatcatgcgcgtc
ttccccggcgtgcagctcgccttcggccctgtcaaagaccaaggctactactacgacctc
gacctgccccacaagctgagcgaggacgacttcgcccgcattgaagctgaaatgcagaag
ctcgtcgaaatggccgagccgttcgagcgttttatcaccaatcgcgatgaagctctggcc
atgctcgaagggatgggccagaagctcaagtgcgaacacattcagataggtctcgccagc
gaagcgactgtcagcttctaccggcaaggggagttcgttgatttgtgccgggggccgcac
attcccgacgccgggcggatcaaagccttccggctgctcagcgtggcgggggcttactgg
aaaggcgatgccagcgggcaacagctccagcgcgtctatggaaccgcgtggttctcgcag
aaggatctcgatgcccacctcgaacaggtgaacgaagccaagcggcgtgatcaccgcgtg
ctggggaagcagctcaacctcttttcgatcagccccgaagtcggggccggcctctgtttg
tggctccccaagggggccactgtgcgggcactcctcgaagagttcatcaagggagaactg
ctcaagcgcggctaccagccggtctacaccccgcatatcggccgggtggaactctacgaa
accagcggccacttcccctactaccgcgattcgcaattcaccccgctctatggccacgac
ggcgggcaactcatcgacttctggatccgcaaactacaagacaacgcgatcagtgaagcc
gacgaaaagtcgctcctcgcttcggcaaagattctgggggtcgagattcccgaatacgct
gccgccagcggcaatccagcgaagatcgaagtgctgcgcacctgggagaagcagcaggaa
cgatatctactcaagccgatgaactgcccgcaccacgcccaaatctacaagtcgatgcag
cgcagctatcgcgatctgcccgtccggttggccgagttcggcaccgtttatcgccacgaa
caatcgggcgagctcaacggaatgctccgcgtccggggcctgacccaggacgacgcgcac
ctcttctgcacacccgaacaagtcgaagaggagttccgcgcgaccttgcagctggtgcag
tttgtgctggcaagcgtggggctggaggattaccgcgtccagctttcgctgcgcgacccc
aagagcgacaagtatgtcgggagcgaagagaactggcagcgggccgaagcgagcctgcga
ggcgtcctcaccgaactcaacctgccgttcaccgcccgcgagggggaagccgcgttctac
ggcccgaaagccgacttcatggtcaaggattgcattggccgcgagtggcaattgggaacc
gtgcagctcgattacaacctgcccgagcgttttcagttggaatatgtgggagcggataat
caggcccaccggccagtgatgattcaccgcgcaccgttcggttcgatggagcgattcacc
ggcatgctgatcgagcacttcgcgggtgcgttcccgttatggctggccccggaacaggtg
cgcgtgctgtcgatcagcgataagttcgaaggctatgcccgcgaagtggagcgcgagttc
cgggccgcgggcttccgcgtgaccaccgatctgcggggggcgaaaatcaacggcaagatc
cgcgatgcgcagatcgagctgatcccgtacatgctggtggtgggggggaaggatcaggag
aatcgcaccgtttcgattcgtgatcggatcgagggagatctcggtgcggtccccctggcc
gaagccatcacccgcctgcagcaggaagtgactgaaaaacgcatccgcagtatcgccaaa
cccgcacctgctcccgcaacgagcaatgagggagagaactacgcggattga
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