Planococcus sp. PAMC 21323: Plano_0005
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Entry
Plano_0005 CDS
T03510
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
pln
Planococcus sp. PAMC 21323
Brite
KEGG Orthology (KO) [BR:
pln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pln03400
]
Plano_0005
DNA repair and recombination proteins [BR:
pln03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Plano_0005
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
DnaB_C
DUF7125
ChlI
nSTAND_NTPase5
AAA_22
Lon_C
AAA_16
RecA_N
ATPase_2
nSTAND3
SLFN-g3_helicase
NTPase_1
AAA_5
DAP3
AAA_30
KTI12
AAA_24
ABC_tran
Rad51
AAA_14
AAA
Fer4_NifH
KdpD
MeaB
CbiA
MCM
NPHP3_N
AAA_31
NACHT
AAA_19
AAA_18
AAA_29
APS_kinase
Glyco_transf_N
HypA
zinc_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
AIY03970
LinkDB
All DBs
Position
4823..6199
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AA seq
458 aa
AA seq
DB search
MAKKKTKFICQSCGYESARWMGKCPGCASWNTMTEEVEVQAPKGTRGAFQHSAAVPQKAT
PINAIETQDEPRVETELSELNRVLGGGIVPGSLVLIGGDPGIGKSTLLLQVSAMLANSGN
RVLYISGEESIRQTKLRAERLDASSSELFIYAETNLELIHHTIEEVAPDFVIVDSIQTVH
HPEVTSAPGSVTQVRESTAELMRIAKTKNIAIFLVGHVTKEGQIAGPRILEHMVDTVLYF
EGERHHTYRILRSVKNRFGSTNEIAIFEMLQGGLKEVLNPSELFLQERSSGSAGSTVVAS
MEGTRPILVEIQALVTPSSFNYPKRMATGIDVNRVTLLMAVLEKRVGMLLQAQDAYIKVA
GGVKLDEPAIDLAVLASIVSSFRDKAPNVYDCIIGEVGLTGEVRRVSRIEQRVQEAAKLG
FKRAIIPASNLGGWDYPEGIRVVGVESVNDALKEIFPQ
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggctaagaaaaaaaccaaatttatttgtcagtcgtgtggctatgaatcggccagatgg
atggggaaatgtccaggttgcgcatcatggaataccatgacagaagaggttgaagttcaa
gctcctaaagggacgcgtggtgcttttcaacatagtgcagctgttccacaaaaagcgacg
ccgattaatgccattgaaacacaagacgaaccacgagtagaaacggaactaagtgaatta
aaccgtgtacttggcgggggaattgtgccagggtcactcgtgcttattgggggagaccca
ggtatcgggaaatcgacattgctgttacaagtttcagcgatgcttgcaaatagtggaaac
cgggtattatatatttccggagaagaatcaattcgccaaacaaaattgcgtgcagagcgt
ttagacgcatcgtcatcagagttatttatttatgctgaaacgaacttagagttaattcac
catacgatagaagaggtagcacctgactttgtcattgtcgactctatacaaactgttcat
cacccggaagtaacttcagcaccaggtagtgtgacgcaagtaagagaaagtacggcagaa
ttaatgcgaatcgccaagacaaaaaatattgcgattttcttagttgggcacgtaacaaaa
gaaggacaaattgcagggcctcgaattttagagcatatggtagatacggtattgtatttt
gagggcgaacgtcatcacacataccgcattttacgcagtgtgaaaaaccggtttggttct
accaatgaaatcgccatttttgagatgcttcaaggtggattaaaagaagtgttaaatcca
tcagaattatttttacaagagcgatcgagtggctcggcaggctcaactgttgttgcttca
atggaaggaacaaggccaattttggttgaaattcaagccttagtcacaccttcaagtttt
aattatccaaaacggatggcgacaggaatcgatgttaaccgcgttacgctgttaatggcg
gttctagaaaagcgcgtaggtatgcttttacaagcgcaagatgcttatatcaaagtagcg
ggtggtgtgaagcttgacgaacctgcaattgatttggcagtgttagcaagcattgtttca
agtttccgtgacaaagcgccaaatgtttatgattgtattattggagaagtcggattgact
ggtgaagtcagacgcgtatcgcgtatcgagcagcgtgttcaagaagcagcgaagttaggc
tttaagcgtgccattattccggcatctaatttaggcggctgggattatccggaaggaatt
cgtgtagttggtgtagaaagtgttaacgatgcattaaaagagatctttccacagtaa
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