Planococcus sp. PAMC 21323: Plano_0284
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Entry
Plano_0284 CDS
T03510
Name
(GenBank) exonuclease SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
pln
Planococcus sp. PAMC 21323
Brite
KEGG Orthology (KO) [BR:
pln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pln03400
]
Plano_0284
DNA repair and recombination proteins [BR:
pln03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Plano_0284
Archaeal homologous recombinant proteins
Plano_0284
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Paralog
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_3
DNA_pol_E_B
Lipase_GDSL_2
Motif
Other DBs
NCBI-ProteinID:
AIY04249
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Position
263998..265164
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AA seq
388 aa
AA seq
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MKFFHTADWHLGKLVQGIYMTEDQQYVLEQFINAIKEEKPDAIIIAGDLYDRAVPPTEAV
NLLDEVLAEIVLELNTPVVAVVGNHDSPGRLNFGSRLMKGNGIYIAGHVHKDHQAVVLND
QFGEVHFHLIPYADPSMIRYEFEDDTIRTHNDAMKAITENIKSAYNPQARHVFVGHAFVT
PHGEQEENTSDSERPLSIGGAEHVDAHHFNGFHYTALGHLHKAHYVLNETIRYSGSPLKY
SISEEHHKKGFHIVELDAEGEVTVEKRLLSPMRDMRTIEGTIEEILRHEISEDYVFVTLL
DEAPVLFPMEKVRSVYPNAMHVGRKNFSGSMLQQETGSRRKMDSLSLFHAFYEEVKGEKA
TEETVDIFKDVLEEFLREEPTVKVEVKS
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgaagttttttcatacagccgactggcatttagggaaattagtgcaaggcatatacatg
acagaagatcagcaatatgtactagaacaatttattaatgcaattaaagaggaaaaacca
gacgccatcattattgctggtgatctctatgaccgtgcagttcctccaacagaggcagtc
aacttactcgatgaagtattggcagaaatcgttttagaattgaatacgcccgtcgtggca
gtagtaggaaatcacgatagtcctgggaggttgaattttggtagtcgtctaatgaaaggc
aatgggatctatatcgcaggacatgttcataaagaccatcaagcggttgtcttaaatgat
cagtttggtgaagttcattttcatttaattccttatgcagatccttcaatgattcgttat
gaatttgaagatgatacgattcgtacacataacgacgcgatgaaagctattacagaaaat
attaagtccgcatataaccctcaagcgcggcacgtgtttgtgggtcatgcatttgtgacg
cctcatggtgagcaagaagaaaataccagcgactcagaacgaccattatcaattggtgga
gcggagcatgtagatgctcatcatttcaacggctttcattacacagcgcttggtcattta
cataaagctcactatgtattgaatgaaactattcgctattcgggatctcctttaaaatat
tcaatatcagaagaacatcataaaaaaggctttcatattgttgaactagacgcagaaggc
gaagttactgtggaaaagcgtttattgtcacccatgcgtgatatgcgaacaatcgaagga
acgatagaggaaatattacgccatgaaattagcgaggattatgtcttcgttactttacta
gacgaggcaccggtgctatttcctatggaaaaagtgcgttccgtttatccgaacgccatg
catgttggacgtaaaaacttctcagggagcatgttgcaacaagagacgggatctcgcagg
aaaatggattccttatctttgttccatgctttttatgaagaagtaaaaggggaaaaggcg
acagaagaaacggtcgacatttttaaagatgtgcttgaagaatttctccgtgaggaacca
actgtaaaagtagaggtgaagtcatga
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