Planococcus sp. PAMC 21323: Plano_0285
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Entry
Plano_0285 CDS
T03510
Name
(GenBank) exonuclease
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pln
Planococcus sp. PAMC 21323
Brite
KEGG Orthology (KO) [BR:
pln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pln03400
]
Plano_0285
DNA repair and recombination proteins [BR:
pln03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Plano_0285
Archaeal homologous recombinant proteins
Plano_0285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
TPR_MLP1_2
AAA_21
Motif
Other DBs
NCBI-ProteinID:
AIY04250
UniProt:
A0A0B4R8F4
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All DBs
Position
265161..268253
Genome browser
AA seq
1030 aa
AA seq
DB search
MRPLKLKMTAFGPYKNTEEIDFTNLQGNQLFVISGSTGSGKTTIFDGICFALYGSASGSD
RSEARILRSDFADDATHTAVEMEFEIHGKKYRVLRQMSHVKKGNKSPTGERFEFFELTEE
GEKPAVERQIVSEINRRIEEIVGLTQNQFSQIVMLPQGEFRKLLTSETDNKEEILRKIFK
TEPYKLISERLKQKKDEAEKIVDREHNKLTIHLQQISSALPERQSELFEVLSREHKNINQ
VLEGLQKETAYYREKISLDEQKYVKAYQLHADKTTAYHEAKKWNDRFEELYAKNAQLQQL
VQRQSEYEEKEAVLQSAEKASYIAGMESLFYELQKDEISKKKLLEDAQNQQEQAEQKKRS
TEQTFYTQQELQSERDKLGEQLVYLQKLLPAIEELTIKKQQLVQLEETAKQSENSLKQAE
KEFNEQKSEKQQLDEKVMEIEKILDSSDNIQQELTVVTEKSRVINDYILLKERNSQLQIV
QQGKKEKFEETAASYRQLEAQWFANQAHVLAGQLHDGEACPVCGSIEHPGVNLKDAEKVV
TKEQVDVAKSSFDQVDGEYRNASAKLIAIEEQLENKAGELTGLKLDINQIEEISNAIVES
KHLLTEKVKQQQAHKIELRKWKEQLTSCSQKIEQLEQKKQSLAKEVQGHSSSFQAATAVF
ENELAAVPEELRELSVLKQQLQQTTLQKQQYEQQWKVAQEQFQNSKEQLASAEVSVGHAT
NTVIEVVQKREKAQQQFVQALEKSAFRSEQAYQQAKMTEAAVTALKKDIEEFNQRRHTLK
QQVSELKELLADQELKDLSQVEIELSELKTDYENAFAEQNRSRNFEKIGNELIDSIQSVI
EKALEAEKNLNRIADLHNMIRGQNGLKISFERYLQIEYLEQIILSANERLKNLSNGQFYL
IRSDRQEARGKQSGLGLDVYDAYTGQTRDVKTMSGGEKFNASLCLALGMADVIQSFQGNV
SIDTMFIDEGFGSLDEESLNKSIETLIDLQKSGRMIGVISHVKELKAAIPAILQVEKSKE
GYSRTKFLIK
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgagaccattaaaactaaaaatgactgcattcggtccatataaaaatactgaagaaatt
gattttactaatttgcaaggaaatcagctatttgttatttcggggagtacaggttcaggt
aaaacgacaatttttgacgggatttgttttgctttgtatggttctgcaagtggttctgac
cgaagtgaggcacgcatattgagaagtgattttgcagatgacgcaacgcatacagctgta
gaaatggaatttgaaattcacggaaaaaaataccgcgtattgcgccaaatgagtcatgtt
aaaaaaggcaataaaagcccgactggagagcgctttgaatttttcgagttaacagaagaa
ggtgaaaagccggcagtcgaacgccaaattgtttcggaaattaatcggcgcatcgaggaa
attgtgggattaactcaaaatcagtttagtcaaattgtcatgttgccacaaggtgagttc
cggaaacttttaacgtcggaaacagacaataaagaagagattcttcggaaaatattcaaa
acagaaccgtataaattgatcagtgagcgcttaaagcaaaagaaagatgaggcagaaaaa
atagttgaccgcgagcataacaaattgactattcatcttcagcagattagctctgcattg
ccagaacgccaatcggaactttttgaagtgttgagccgcgaacataaaaatatcaatcaa
gtgctagagggcttacaaaaagaaacagcttattacagagaaaaaatcagtctagatgag
caaaaatacgtaaaggcttatcaacttcatgctgataagacgacagcttatcatgaagcg
aaaaaatggaacgaccgttttgaagaactctatgcgaaaaacgctcaattacaacagctt
gtgcaacgtcagtcggaatatgaagaaaaagaagccgttttacaatcggcggagaaagcc
agttatattgctggaatggaaagcttattttatgaactgcaaaaagatgaaatcagcaaa
aagaagttgcttgaagatgcacaaaatcagcaagaacaagcagaacaaaagaaacgttca
acagaacagacattttatactcaacaagagttacaaagtgagcgtgataaattaggcgag
cagcttgtatatttgcaaaaattattgccagctatagaagagttaacgataaaaaaacaa
caacttgtacagctcgaagaaaccgcaaaacagtcggagaacagcttaaagcaagcagaa
aaagaatttaacgaacaaaaaagtgagaaacaacaattagatgaaaaagtcatggaaata
gaaaaaattctagattcatctgataatatacaacaagagttaacagtcgtaactgaaaaa
tcgcgtgtaataaatgactatattttattgaaagagcgaaacagccaactgcaaatcgtg
caacaaggcaaaaaggagaaatttgaagaaaccgcagcttcttatcgccaactagaagcg
cagtggtttgcaaaccaagcgcatgttcttgccggtcaattgcatgacggagaagcatgt
cctgtttgtggaagtatcgaacatcctggagtgaatttaaaggatgcagagaaagtcgta
acgaaagagcaagtagacgtggcaaaatctagctttgatcaagtagatggagaataccgc
aatgcgtcagcgaagctaattgctatagaagagcagttggaaaacaaagcgggtgaatta
actggactaaaattagacattaaccaaatagaagaaatttcaaacgctatagtagaatcc
aaacatctattaactgaaaaagtaaaacaacagcaggctcataaaatcgagttacgaaaa
tggaaagaacaattgactagttgttctcagaagattgaacaactagaacaaaagaaacag
agcttggctaaagaagtgcaaggtcatagttcatcttttcaagcagctacagccgttttt
gaaaatgaattggccgcagttccagaagaacttcgtgagctgtctgtcttgaagcaacaa
ttacaacaaacaacattacaaaaacaacagtatgagcaacagtggaaagtggctcaagaa
caattccaaaactcgaaagaacagttggctagtgcggaagtatctgtcggtcatgctaca
aatacagtaatagaagtagtgcaaaagagagaaaaagctcagcaacaatttgtacaggct
ctggaaaaatcggcatttagatctgaacaagcttatcagcaagcaaaaatgacagaagca
gcagttacagcgttgaaaaaagatattgaagagtttaatcaacgccgccatacgttaaag
cagcaagtaagtgaattgaaagaattgctagcggatcaagagttaaaggatttaagtcaa
gtagaaatcgagttgtctgaactgaaaacagattacgaaaatgctttcgcagaacagaat
cgttcacgaaatttcgagaagataggtaatgaattaatcgacagcattcaaagtgtcatt
gaaaaagcacttgaagcagagaaaaatctcaatcgaattgcagatttgcataatatgatt
cgtggacaaaatgggttaaaaatttcgtttgaacgctatttacaaatcgagtatttggaa
caaatcatcttatctgccaatgaacggttgaaaaacttatcgaatggtcaattttatttg
attcgcagcgaccgacaagaagcacgcggtaaacaaagcggtcttggattagatgtctat
gatgcgtataccggacaaactcgagatgttaaaacaatgtcagggggagaaaaatttaat
gcttcgctttgcttagcgcttggtatggctgatgttattcaaagctttcaaggaaatgtc
tcgattgatacgatgtttattgacgaagggttcggatcgctcgatgaagaatcacttaat
aagtcgattgaaaccttgatcgatttgcaaaaatccggacgtatgatcggggttatttca
catgtgaaagaactaaaagcagcgattcctgccatattgcaagttgaaaaatcaaaagaa
ggttatagtcggactaagtttcttattaagtaa
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