KEGG   Planococcus sp. PAMC 21323: Plano_0285
Entry
Plano_0285        CDS       T03510                                 
Name
(GenBank) exonuclease
  KO
K03546  DNA repair protein SbcC/Rad50
Organism
pln  Planococcus sp. PAMC 21323
Brite
KEGG Orthology (KO) [BR:pln00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pln03400]
    Plano_0285
DNA repair and recombination proteins [BR:pln03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     Plano_0285
    Archaeal homologous recombinant proteins
     Plano_0285
SSDB
Motif
Pfam: AAA_23 SbcC_Walker_B AAA_29 SMC_N TPR_MLP1_2 AAA_21
Other DBs
NCBI-ProteinID: AIY04250
UniProt: A0A0B4R8F4
LinkDB
Position
265161..268253
AA seq 1030 aa
MRPLKLKMTAFGPYKNTEEIDFTNLQGNQLFVISGSTGSGKTTIFDGICFALYGSASGSD
RSEARILRSDFADDATHTAVEMEFEIHGKKYRVLRQMSHVKKGNKSPTGERFEFFELTEE
GEKPAVERQIVSEINRRIEEIVGLTQNQFSQIVMLPQGEFRKLLTSETDNKEEILRKIFK
TEPYKLISERLKQKKDEAEKIVDREHNKLTIHLQQISSALPERQSELFEVLSREHKNINQ
VLEGLQKETAYYREKISLDEQKYVKAYQLHADKTTAYHEAKKWNDRFEELYAKNAQLQQL
VQRQSEYEEKEAVLQSAEKASYIAGMESLFYELQKDEISKKKLLEDAQNQQEQAEQKKRS
TEQTFYTQQELQSERDKLGEQLVYLQKLLPAIEELTIKKQQLVQLEETAKQSENSLKQAE
KEFNEQKSEKQQLDEKVMEIEKILDSSDNIQQELTVVTEKSRVINDYILLKERNSQLQIV
QQGKKEKFEETAASYRQLEAQWFANQAHVLAGQLHDGEACPVCGSIEHPGVNLKDAEKVV
TKEQVDVAKSSFDQVDGEYRNASAKLIAIEEQLENKAGELTGLKLDINQIEEISNAIVES
KHLLTEKVKQQQAHKIELRKWKEQLTSCSQKIEQLEQKKQSLAKEVQGHSSSFQAATAVF
ENELAAVPEELRELSVLKQQLQQTTLQKQQYEQQWKVAQEQFQNSKEQLASAEVSVGHAT
NTVIEVVQKREKAQQQFVQALEKSAFRSEQAYQQAKMTEAAVTALKKDIEEFNQRRHTLK
QQVSELKELLADQELKDLSQVEIELSELKTDYENAFAEQNRSRNFEKIGNELIDSIQSVI
EKALEAEKNLNRIADLHNMIRGQNGLKISFERYLQIEYLEQIILSANERLKNLSNGQFYL
IRSDRQEARGKQSGLGLDVYDAYTGQTRDVKTMSGGEKFNASLCLALGMADVIQSFQGNV
SIDTMFIDEGFGSLDEESLNKSIETLIDLQKSGRMIGVISHVKELKAAIPAILQVEKSKE
GYSRTKFLIK
NT seq 3093 nt   +upstreamnt  +downstreamnt
atgagaccattaaaactaaaaatgactgcattcggtccatataaaaatactgaagaaatt
gattttactaatttgcaaggaaatcagctatttgttatttcggggagtacaggttcaggt
aaaacgacaatttttgacgggatttgttttgctttgtatggttctgcaagtggttctgac
cgaagtgaggcacgcatattgagaagtgattttgcagatgacgcaacgcatacagctgta
gaaatggaatttgaaattcacggaaaaaaataccgcgtattgcgccaaatgagtcatgtt
aaaaaaggcaataaaagcccgactggagagcgctttgaatttttcgagttaacagaagaa
ggtgaaaagccggcagtcgaacgccaaattgtttcggaaattaatcggcgcatcgaggaa
attgtgggattaactcaaaatcagtttagtcaaattgtcatgttgccacaaggtgagttc
cggaaacttttaacgtcggaaacagacaataaagaagagattcttcggaaaatattcaaa
acagaaccgtataaattgatcagtgagcgcttaaagcaaaagaaagatgaggcagaaaaa
atagttgaccgcgagcataacaaattgactattcatcttcagcagattagctctgcattg
ccagaacgccaatcggaactttttgaagtgttgagccgcgaacataaaaatatcaatcaa
gtgctagagggcttacaaaaagaaacagcttattacagagaaaaaatcagtctagatgag
caaaaatacgtaaaggcttatcaacttcatgctgataagacgacagcttatcatgaagcg
aaaaaatggaacgaccgttttgaagaactctatgcgaaaaacgctcaattacaacagctt
gtgcaacgtcagtcggaatatgaagaaaaagaagccgttttacaatcggcggagaaagcc
agttatattgctggaatggaaagcttattttatgaactgcaaaaagatgaaatcagcaaa
aagaagttgcttgaagatgcacaaaatcagcaagaacaagcagaacaaaagaaacgttca
acagaacagacattttatactcaacaagagttacaaagtgagcgtgataaattaggcgag
cagcttgtatatttgcaaaaattattgccagctatagaagagttaacgataaaaaaacaa
caacttgtacagctcgaagaaaccgcaaaacagtcggagaacagcttaaagcaagcagaa
aaagaatttaacgaacaaaaaagtgagaaacaacaattagatgaaaaagtcatggaaata
gaaaaaattctagattcatctgataatatacaacaagagttaacagtcgtaactgaaaaa
tcgcgtgtaataaatgactatattttattgaaagagcgaaacagccaactgcaaatcgtg
caacaaggcaaaaaggagaaatttgaagaaaccgcagcttcttatcgccaactagaagcg
cagtggtttgcaaaccaagcgcatgttcttgccggtcaattgcatgacggagaagcatgt
cctgtttgtggaagtatcgaacatcctggagtgaatttaaaggatgcagagaaagtcgta
acgaaagagcaagtagacgtggcaaaatctagctttgatcaagtagatggagaataccgc
aatgcgtcagcgaagctaattgctatagaagagcagttggaaaacaaagcgggtgaatta
actggactaaaattagacattaaccaaatagaagaaatttcaaacgctatagtagaatcc
aaacatctattaactgaaaaagtaaaacaacagcaggctcataaaatcgagttacgaaaa
tggaaagaacaattgactagttgttctcagaagattgaacaactagaacaaaagaaacag
agcttggctaaagaagtgcaaggtcatagttcatcttttcaagcagctacagccgttttt
gaaaatgaattggccgcagttccagaagaacttcgtgagctgtctgtcttgaagcaacaa
ttacaacaaacaacattacaaaaacaacagtatgagcaacagtggaaagtggctcaagaa
caattccaaaactcgaaagaacagttggctagtgcggaagtatctgtcggtcatgctaca
aatacagtaatagaagtagtgcaaaagagagaaaaagctcagcaacaatttgtacaggct
ctggaaaaatcggcatttagatctgaacaagcttatcagcaagcaaaaatgacagaagca
gcagttacagcgttgaaaaaagatattgaagagtttaatcaacgccgccatacgttaaag
cagcaagtaagtgaattgaaagaattgctagcggatcaagagttaaaggatttaagtcaa
gtagaaatcgagttgtctgaactgaaaacagattacgaaaatgctttcgcagaacagaat
cgttcacgaaatttcgagaagataggtaatgaattaatcgacagcattcaaagtgtcatt
gaaaaagcacttgaagcagagaaaaatctcaatcgaattgcagatttgcataatatgatt
cgtggacaaaatgggttaaaaatttcgtttgaacgctatttacaaatcgagtatttggaa
caaatcatcttatctgccaatgaacggttgaaaaacttatcgaatggtcaattttatttg
attcgcagcgaccgacaagaagcacgcggtaaacaaagcggtcttggattagatgtctat
gatgcgtataccggacaaactcgagatgttaaaacaatgtcagggggagaaaaatttaat
gcttcgctttgcttagcgcttggtatggctgatgttattcaaagctttcaaggaaatgtc
tcgattgatacgatgtttattgacgaagggttcggatcgctcgatgaagaatcacttaat
aagtcgattgaaaccttgatcgatttgcaaaaatccggacgtatgatcggggttatttca
catgtgaaagaactaaaagcagcgattcctgccatattgcaagttgaaaaatcaaaagaa
ggttatagtcggactaagtttcttattaagtaa

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