Planococcus sp. PAMC 21323: Plano_1117
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Entry
Plano_1117 CDS
T03510
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pln
Planococcus sp. PAMC 21323
Pathway
pln03030
DNA replication
pln03410
Base excision repair
pln03420
Nucleotide excision repair
pln03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pln00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Plano_1117
03410 Base excision repair
Plano_1117
03420 Nucleotide excision repair
Plano_1117
03440 Homologous recombination
Plano_1117
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pln03032
]
Plano_1117
03400 DNA repair and recombination proteins [BR:
pln03400
]
Plano_1117
Enzymes [BR:
pln01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Plano_1117
DNA replication proteins [BR:
pln03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Plano_1117
DNA repair and recombination proteins [BR:
pln03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Plano_1117
NER (nucleotide excision repair)
GGR (global genome repair) factors
Plano_1117
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
HHH
Motif
Other DBs
NCBI-ProteinID:
AIY05082
LinkDB
All DBs
Position
1150398..1153016
Genome browser
AA seq
872 aa
AA seq
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MAKKILLLDGNSLAYRAFFALPLLTNENGIHTNAVYGFTMMLQKILDEEQPTHMIVAFDA
GKTTFRHKTFSEYKGGRQKTPPELSEQFPYLRKLIDAYGIKRYELENYEADDIIGTLSLE
AEREGDEVVVISGDKDLTQLASPTTTVYITRKGITDIEKYTVEHIKEKYGLTPLQIIDMK
GLMGDASDNIPGVPGVGEKTALKLLAAHGSVEGVYEAIEQQKGKMKEKLIANEDLAYISK
QLATIERQAPIEIKIDELGYSGPDQDELIKVWKELAFKSLLEKMEYTAEETVKEELEFEV
LTKIDPSILKDEMAVHLELYDDHYHSCDLLGVSLASETDTYVIPMNVVEQSEEFHAWCKD
STKKKFMSDSKAATAAFLRFGVELKGVDFDLMLGAYIVNPSLTYTDMASIVQEYGYTDVS
TNEQVYGKGAKKKVPEDAVLHEHIARKARTIWKVRPLIMEKLEENEQFDLYDKLELPLAT
VLGQMESLGVMVNRDQLVDMGKELSHKLEKIESDIHGLAGQEFNINSPKQLGVILFEKLG
LPPLKKTKTGYSTAADVLEKLEGQHEIISYILMYRQLGKLLSTYIEGLLKEIHEDGKIHT
RFQQALTTTGRLSSINPNLQNIPVRLEEGRKIRKAFVPSEPGWVMVAADYSQIELRVLAD
MSEDERLVQAFKDDRDIHTTTASDVFHVAEEEVTGDMRRAAKVVNFGIVYGISDYGLSQN
LNIPRKEAAAFIERYFTSFPGVKSYMTNIVADAKRDGFVTTLMNRRRYLPDITSSNFNLR
SFAERTAMNTPIQGSAADIIKKAMIDMDAALEREGLQARMLLQVHDELIFEAPPEELDQL
MKLVPEVMENAVKLSVPLKVDIAHGSTWYDTK
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaagaaaatacttttattagatgggaatagtttggcgtatcgcgcattttttgct
ttaccactattaactaatgaaaacggcattcacacgaatgcagtatacggatttaccatg
atgcttcaaaaaatactcgatgaagaacaacctacacatatgattgtggcttttgatgcc
ggaaaaacaactttccgccacaaaacatttagcgaatacaaaggtggcagacaaaaaaca
ccacctgaattatcggaacaatttccttacctccgcaaattgatcgatgcttatgggatc
aaacgctacgaattagaaaattatgaagcagatgacatcatcggtactttgagtttagaa
gctgagcgggaaggcgatgaagttgtcgttatttctggcgataaagatttaacacaatta
gcatctcctacaacgacagtttacattacacgaaaaggcattacagatatcgaaaaatat
acagttgagcatattaaagaaaaatacggcttaacgcctcttcaaattattgatatgaaa
ggccttatgggcgatgcttcggataacattccaggtgtaccaggtgtaggagaaaaaact
gcgctgaaattattagcggcacacgggtcagttgaaggcgtttatgaagcaatcgaacaa
caaaaaggcaagatgaaagaaaagttaattgctaatgaagatttagcttatattagtaag
caactcgcgacaattgaacgacaagctccaatagaaattaaaatcgatgaattaggttac
tctggaccagatcaagacgagttaattaaagtgtggaaagaacttgcgtttaaatcgtta
cttgaaaaaatggagtacaccgcagaagaaacggtaaaagaagagttggaatttgaggtg
ctgacaaagattgacccatctatcttaaaagatgaaatggcagttcatcttgaactttac
gatgatcactatcatagttgtgatttgctaggtgtgtcgcttgcgagtgaaaccgatacg
tatgttattccgatgaatgttgtggagcagtcagaagagtttcatgcatggtgcaaagat
tcgacaaagaaaaaattcatgtcggactctaaagcagcaacggcagcatttttacgattc
ggcgttgaactcaaaggcgttgatttcgatttaatgttaggagcttatatcgtcaatcca
tcattaacgtacactgatatggcgagtattgttcaagaatatggttataccgatgtgtcg
accaatgaacaagtctacggcaaaggtgctaaaaagaaagttccagaagatgctgtttta
catgaacatatcgctagaaaagcacgaaccatctggaaagtccgcccactcattatggaa
aagcttgaagaaaacgagcaatttgatttatacgataaattagagttgccattagcaacc
gttttggggcaaatggaatctcttggtgtaatggtaaaccgtgaccaattagtagatatg
ggcaaagagttgtctcataagttagagaaaatcgagagtgatatccacgggttagcagga
caagagtttaatatcaattcaccaaaacaattaggtgttattttgtttgaaaaactaggg
ttaccgcctctaaagaaaacaaagaccggttattcaacagcagcagatgttctagaaaaa
ttagaaggacagcatgaaattatttcctatatattaatgtatcgtcaattaggtaaacta
ttgtctacttatattgaaggtttattaaaagaaatccacgaagatggaaaaattcataca
cgctttcaacaagcactcacaacaacaggtcgattaagttcgatcaatccgaacttgcaa
aatattccagtgagacttgaagaagggcgtaaaatccgtaaagcttttgtcccatcagag
ccaggatgggtaatggtggcggcagattattcccaaattgaattacgtgtacttgcggat
atgtcagaagatgaacgtttagtgcaagcattcaaagacgatcgtgatattcatacgacg
acggcgagtgatgttttccatgtagcagaagaagaagtaacaggagacatgcgccgagcg
gctaaagttgttaactttggaattgtttatggcattagtgattacggtttgtctcaaaat
ttaaatatacctcgtaaagaagcagcggcttttattgagcgttattttacgagcttcccg
ggtgtaaaaagctatatgacaaacattgtagctgatgcaaaacgcgacggctttgtcact
accttaatgaatcgtcgccgttatttaccagacatcacaagttcgaactttaacttaaga
agctttgctgaacgtacagcgatgaatacaccgattcaaggcagtgcagcagatattatt
aaaaaagccatgattgatatggatgcagcgttagagcgcgagggactacaagcccgcatg
cttttacaagtacacgatgaattgatttttgaagcaccccctgaagaattagatcaattg
atgaaattagtaccagaggttatggaaaacgcagtgaaattaagtgtgccattaaaagtg
gacattgcccacggttctacttggtacgatactaaatga
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